Ictalurus punctatus (channel catfish): 108278167
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Entry
108278167 CDS
T04658
Symbol
snx19b
Name
(RefSeq) LOW QUALITY PROTEIN: sorting nexin-19
KO
K17930
sorting nexin-19
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108278167 (snx19b)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108278167 (snx19b)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
108278167
NCBI-ProteinID:
XP_017346840
Ensembl:
ENSIPUG00000015323
UniProt:
A0A2D0SWZ8
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All DBs
Position
17:6141686..6178089
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AA seq
1000 aa
AA seq
DB search
MTQPESLSPSMMALPEFIMQRKLLGFGVLLAWVVLFHLLVNVWLLCVFTSLLVVIGGWLG
SQALLESESVIHLERFITLDEIRSSPDVEMQLDHEIQSTVSKIIRDFVSSWYNTVSTEPG
FEDEIHDAMISMAMQLKLRAKKVDRKALTLRILDLCGCHLQCYVKAKEIMAGKAGEEQSV
SANESVWQAYSTSCVPHPALQSSAVEVNYARAVVDLLLHVLVPPPHLETRTGRFVVCELI
MCNVLLPLIAKLSDPDWLNMLIVDVFTRSKNPETKPSESEKTTSPPTMLLNKDNSHDVEV
PSSLTLKLKPDTFSVTDAPTPELANLDVLDSADLYCPQNQEDEGPRQLFSSEHPGFNTKD
YLRLGKSNPFYQETDSDLESPLNDFKRSSLESLVLIGTEEETSEPVTECPTLADGILDPK
DEFHVNSNAPRLVVSEIQEQPSDTTDGTGEPSLSFCALQELEKGTTKAEMTGVETSGMVN
VNGLTLSEPLQASSPLASSMPLSPFTFEPLSSPEGPVIIQNLRITGTITAKEHRGTGSHP
YTLYTVKYETAVDSENPGTLQPVAYHMVNRRYSEFLNLQTRLEEKPELRKILKHVKGPKK
IFPDLPFGNMDSDRVEARKGLLETFLKQLCSVPETANSEEMQEFLALNTDARIAFVKKPF
IVSRIDKIVVNAIVDTLKTAFPRSEPQSPTDEVDTEPDGKLSSDRKSKSRMRFSSKTASA
LNVSDMKPKVLYYFDEGSTVFNSLTMNSLESFILERERLASKAPLRDADGERDVGLGAKW
VTEPCACSKGRLQNVVENQGETVLADTALNVLYLLMKDQWSWLCTENIQRSIRLLFGTLV
ERWLEVGVANLTCMQYWVTYLRVLQQAVWPGGNLPAHPRPQRTQQQRDDTKQQSLQCLMN
LLPDLVSDILGSEKYKHSWQVVLDSLQDSTINRHLVYCVWDVLLEFLIPELSDDDFQKML
LQSLSKXTQRNSLHRNAVKLDMPVPTTHYSCQNESGQSWR
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcctgagagcctcagcccatctatgatggccttgcctgaattcataatgcaa
agaaaacttcttggatttggtgtgctactggcttgggttgtcctcttccatttactggtc
aacgtgtggctcctctgtgtgtttaccagccttttagtagttataggtgggtggcttggc
tcacaggctctcctcgagtctgaaagtgtcatccaccttgagcgtttcatcacgctggac
gagatccgatcttccccagacgtcgagatgcagctagaccacgagatccagagcacggtt
tctaagatcatccgagacttcgtctcttcgtggtataacaccgtttccacagagcctggg
tttgaggatgagatccacgacgccatgatctcgatggcaatgcagcttaagcttcgggcc
aagaaagtggacaggaaagctttaactctgaggatattagatctttgtggatgccatctt
cagtgctacgttaaagctaaagaaatcatggctggaaaagcaggcgaggaacaaagtgtg
agtgctaacgagagtgtctggcaggcatacagcacgtcttgtgtacctcacccagctctt
caaagctctgctgtagaagtgaattacgcacgtgcagtagtggatttgcttttgcacgtt
cttgtcccgccaccacatcttgaaaccaggacagggagatttgtagtgtgcgaacttata
atgtgcaatgttcttttgcctttaattgctaaactgtcagatcctgactggttaaatatg
ttgatcgtggacgtatttacgaggtccaaaaatccagaaaccaaaccatctgaatcggag
aaaacgacatctcctccaacgatgcttttaaataaagacaattcacacgatgttgaagtt
ccatcttctctaaccttgaagctcaagcccgacactttcagtgtgactgacgcgccaaca
cccgaattggcaaatttggatgttcttgactctgcagatctttactgtccacagaaccaa
gaggacgaaggaccaaggcagttgttttcttcagagcatccaggtttcaatacaaaggat
tatttgcggctcgggaaatcgaatcctttctatcaagaaacagactctgatttggagtct
cctctaaacgattttaaaaggagctccttggagtcgctggttctgataggcacagaagaa
gaaacgtcagagcctgttaccgaatgtcccacgcttgccgacggaatactggaccccaaa
gatgagttccatgtcaattctaatgcaccaagactcgtggtctcggagatacaagaacaa
ccctctgacacaactgatgggacaggtgaaccgtctttgagcttttgtgctcttcaggaa
cttgaaaagggtaccacgaaagcagaaatgactggcgttgagacgtcgggtatggtgaac
gtcaacgggctgactctgtccgaacctcttcaagcctcctcacctttagccagctccatg
ccactctctccattcacgttcgaacccctcagtagtcctgaaggccccgtcattattcag
aaccttcgtatcacaggcaccatcacagctaaggagcaccgaggcacgggctctcatcca
tacacactctacactgtgaagtacgagacagctgtggactcagagaatccaggcacattg
cagccagtggcttatcacatggtcaatcggcgctatagtgaatttctgaatctgcagacc
cggttagaggagaaacctgaattacgcaaaattctcaaacatgttaaaggacctaaaaaa
atctttcctgacctcccttttggaaacatggacagtgaccgagttgaagccagaaaaggt
ttattggaaacgttccttaagcaactttgttcagtacctgaaactgccaacagtgaagaa
atgcaagagtttcttgccctaaacactgatgcgaggatcgcttttgtaaagaagccattc
atcgtctcacgaatagacaagattgtggtgaatgctatagtcgatacgctgaagacagcc
ttccctcgttcagagccacaaagccccacggatgaagtggacactgagcctgatgggaaa
ttatcttcagacaggaagagcaagtccaggatgcgattctccagtaaaaccgcttctgct
cttaacgtgtccgacatgaaacccaaagtgctttactactttgatgaagggagcaccgtt
ttcaatagcctcaccatgaatagtctagagagcttcatcttggagcgggagcgtcttgcg
agtaaagcaccgctccgagacgccgatggagagcgggatgtcggcctcggtgccaagtgg
gttacggagccctgcgcgtgttcgaaaggaaggttgcaaaatgtcgttgaaaatcagggg
gaaactgtacttgctgacacagctctgaacgtcctctatctgctgatgaaggatcagtgg
agttggctgtgcactgaaaatatccagaggagcatcagactgctatttgggaccctcgtt
gagcggtggctggaggtcggagtggctaatctgacgtgtatgcagtactgggtgacttat
ttgcgggtgctgcagcaggctgtgtggcctgggggaaatctgcctgctcatccccgacct
cagcgaacccagcagcaaagagatgacaccaaacagcagtcactgcagtgtttgatgaat
ttgcttcctgatcttgtttcggatatactgggctcagagaagtacaagcattcctggcag
gtcgttctcgactctctccaagattctaccataaacaggcacctggtttactgtgtgtgg
gatgtgctattggagttcctgatcccagagctatctgatgacgactttcaaaagatgctg
ctccagagtctttctaaannaacgcagagaaactccctccataggaacgccgtgaaactt
gacatgcctgttccaacaacccactactcttgtcagaatgagtcaggtcagtcatggagg
tga
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