Ictalurus punctatus (channel catfish): 108278225
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Entry
108278225 CDS
T04658
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108278225 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108278225 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108278225 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108278225 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108278225 (si:ch211-11n16.2)
Membrane trafficking [BR:
ipu04131
]
Autophagy
Other autophagy associated proteins
Others
108278225 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
108278225 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
108278225
NCBI-ProteinID:
XP_017346927
Ensembl:
ENSIPUG00000018343
UniProt:
A0A2D0SW58
LinkDB
All DBs
Position
17:complement(4265479..4273224)
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AA seq
652 aa
AA seq
DB search
MSEMLLKEMEEVSLGQSKEEEESSSGRSFLLIDENESLQVENEGHFLRKLGCSAAEGVKV
LSIFGNTGDGKSHTLNHVLFDGEEVFATSPSPSSCTIGVWAAYEPRLGLIVLDTEGLLGA
ATQQNQRMRLLLKVLAVSDVAVYRTRAERLHNDMFHFFGSASAAYLKYFTPQLRALSNRC
GLDVPLSNLGPAAVVFQETSRTQLLGHDTTVPADIVLQKRFHDLGLGTEAFSSVQYVGTQ
TITPPTDFSQLKETITKQVKSTASRAPRQPDIVFSALQALSDRFCGEISDDKISMYSFFP
DEYFTCPSVCLSCSIRCKNGMNHQKDRMPHMADGLCQYAHQYNNKVLICKKCYEGGREVI
VVPKTSASTDNPWFGLAKYAWSGYVLECPYCGIIYRSRQYWLGNQDPESTVVRTEVKHVW
QGSESFQADHQNAAQRVLDGVNYVLQSVSEYSSGPTKAVTAWITDQVAPPYWRPNAEITE
CHGCKRVFGEAERKHHCRACGEGFCQACSTRSMPVPERGWGRNPVRVCDACYQQGGAAQT
VQVAQTEPKALVARRVTEMAQSTLDMVSTAVDFPLCFVKGVARPDYWVPDHEITQCHQCT
KAFSSSVPKHHCRACGQGVCGGCSAQCRPVPSRGWDHPVRVCDACATQLDSQ
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagatgttactgaaagagatggaagaagtatctctgggtcaatcgaaggaagaa
gaagaatcgagcagcggacggagttttctcctcatcgatgaaaatgaatccctgcaggtg
gaaaacgaaggtcacttcctcaggaaactgggctgcagcgcggcagaaggagtgaaggtg
ctctcgatctttggcaacaccggcgacggcaaatcgcacacgctgaaccacgttctgttt
gacggcgaggaagtgttcgccacgtctccctctccctcttcatgcaccatcggagtgtgg
gccgcgtacgagcctcgtctgggcctgatcgtgctggacacagagggcctgctcggcgca
gccactcagcagaaccagagaatgcgcctgctgttgaaggtgctggccgtgtccgacgta
gccgtgtaccgcacgcgggccgagcgtctgcacaacgacatgttccatttcttcggaagc
gcttcagctgcgtatctgaagtacttcacacctcagctgcgtgctctgtccaaccggtgc
gggctcgacgtaccactctcgaacctcgggccagcggcggtggtgttccaggagacctcg
cgcactcagctgctgggtcacgacactacagtcccggcagatatcgtgcttcagaagcgt
ttccatgacctgggcctgggcacagaagccttcagctcggtgcagtatgtgggcacgcag
accatcacacctccaacagacttctctcagttaaaggagaccatcacaaagcaggtgaag
agcacggcatcacgagccccacgccagccagacatcgtcttcagcgcccttcaggccttg
agcgatcggttctgtggagaaatctccgatgacaaaatcagcatgtactccttctttcct
gacgagtatttcacctgcccttctgtctgcctcagctgcagcattcgttgcaagaacggc
atgaatcaccagaaggacagaatgccgcatatggcagacggattatgccagtacgctcat
cagtacaacaacaaggttctcatatgcaagaaatgctatgaaggtggaagggaagtgatc
gtcgtgcccaaaacctccgcctccaccgacaacccgtggtttggtctggcaaagtacgcc
tggtccgggtatgtgctggagtgtccgtactgtggcatcatctaccggagcaggcagtac
tggttggggaatcaagaccccgagagcaccgtggtgcgcactgaagtcaagcacgtctgg
caggggtcggaatctttccaggcagaccatcagaacgcggctcagcgagtgctcgacggt
gttaactatgtcctccagtcggtgtcagagtacagctccggtcccaccaaagcagtcacg
gcctggatcacggatcaggtggctccgccatactggagacctaacgctgaaatcacagaa
tgccatggctgtaagcgagtgttcggggaggcggagaggaagcaccactgccgtgcttgc
ggtgagggtttctgtcaggcctgctccacccgcagcatgcctgtgcccgagagaggctgg
ggcaggaacccggtgcgagtttgcgacgcctgctaccagcaaggaggagctgcacaaacc
gtccaggtggcgcagacagagcccaaggcactcgtggcccggagggtgacggagatggcg
cagtctacactggacatggtctccaccgcggtcgacttcccgctctgtttcgtaaaggga
gtggctcgacccgactactgggttccggaccacgagatcactcagtgccaccagtgtacc
aaggcgttcagctcgagcgtgcccaagcaccactgccgcgcgtgtggtcagggggtgtgt
ggtggctgctcggctcagtgccgccccgtgccctctcgtggctgggaccatccggtgagg
gtgtgcgatgcctgcgccacacagttagactcccagtga
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