Ictalurus punctatus (channel catfish): 108278260
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Entry
108278260 CDS
T04658
Symbol
rab38a
Name
(RefSeq) ras-related protein Rab-38 isoform X1
KO
K07923
Ras-related protein Rab-38
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108278260 (rab38a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ipu04031
]
108278260 (rab38a)
Membrane trafficking [BR:
ipu04131
]
Others
Specific organelles associated proteins
Melanosome
108278260 (rab38a)
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rab Family
Rab29/32/38 [OT]
108278260 (rab38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
GTP_EFTU
MMR_HSR1
AAA_7
AAA_22
PduV-EutP
TniB
AAA_16
cobW
DLIC
AAA_24
nSTAND3
TsaE
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
108278260
NCBI-ProteinID:
XP_017346972
Ensembl:
ENSIPUG00000002584
UniProt:
A0A2D0SWA3
LinkDB
All DBs
Position
17:complement(2954902..2958045)
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AA seq
208 aa
AA seq
DB search
MQRREHRYKVLVIGDLGVGKTSIIKRYVHQHFSANYRATIGVDFALKVLNLDQDTIRLQL
WDIAGQERFGNMTRVYYRDALGAFVVFDVARSCTFEAVRKWKEDLDDKVSASGGKRVAAV
LLANKCDQDRDDTFAKNYGRMEQFCREHGFINWFETSAKENINIDEAVTCLLRHIMASDT
ELLQTDGMNISPKLDSGRSPPCSACLRP
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggagggagcatcgctataaggtcctggtgatcggagacctcggcgtcgggaag
acgagcatcatcaagcgctacgtgcaccagcacttctccgctaactaccgggccaccatc
ggagtggacttcgccctcaaagtgctcaacctggatcaggacacgatccggctgcagctg
tgggacatcgcaggtcaggaacgttttggcaacatgacgcgtgtgtattaccgtgacgcc
ctcggcgccttcgtggttttcgacgtggcgcggtcgtgcacattcgaggcggtgaggaag
tggaaggaggatctagacgacaaggtgagcgcgtcgggcgggaaacgggtcgccgccgtg
ctgctcgcaaacaaatgcgaccaggacagagacgacaccttcgccaaaaactacgggcga
atggagcagttctgccgagagcacggcttcatcaactggttcgagacgtcagccaaggag
aacattaatatagatgaagctgttacctgtctactgagacacatcatggccagtgacaca
gaactgctccagacggacggcatgaacatctcccctaaactggattcgggacgcagcccg
ccctgctctgcctgcttgaggccctaa
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