Ictalurus punctatus (channel catfish): 108278292
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Entry
108278292 CDS
T04658
Symbol
alcamb
Name
(RefSeq) CD166 antigen homolog
KO
K06547
activated leukocyte cell adhesion molecule
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108278292 (alcamb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108278292 (alcamb)
04090 CD molecules [BR:
ipu04090
]
108278292 (alcamb)
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
Other
108278292 (alcamb)
CD molecules [BR:
ipu04090
]
Proteins
108278292 (alcamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
C2-set_2
ig
V-set
C1-set
Ig_4
Ig_PDGFR_d4
DUF6377
Izumo-Ig
Protocadherin
Herpes_gp2
EssA
PKD
DUF6479
Motif
Other DBs
NCBI-GeneID:
108278292
NCBI-ProteinID:
XP_017347039
Ensembl:
ENSIPUG00000014477
UniProt:
A0A2D0SWI3
LinkDB
All DBs
Position
17:complement(6638163..6661744)
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AA seq
564 aa
AA seq
DB search
MRLTAFSACVLIMSLLDQVSGLTTIVGKYGETVEVPCNKGDIKVEDIMIAKWKYTKADGT
IVDILTKSKSQDASFYPIVEYEGRLNLTKDLSLQISQAKMADQKTLTCLVVAGTEIFEYP
VQVTIQKAPSPPAITNQSKVIELGKLTTLAVCTAKDASPLAIVTWLKDNVPLVADGKVVN
ITLNVQTDKNTGLSNTSSKLEYAATKADMNAKFTCSVHHKSLASDLVSAPMTFVIHYPSE
KVSLQVMSADPIKEGDNVTLKCAADGNPPPTSYNFHIKEKKVTTENSDTYTLHNVTRADS
GEYKCSLVDNEGKTGSTSFTVMYLHIAAVSQGKIAKNLSESFEATLEVNASGNPQVLWTK
NNVRLNGKPKFDKLKYSDSGVYECVVSVGGLVKKASFELSVQGAPVITMLTKCGSNGHKI
LSCKAEGSPKPTVQWSINGTNATESSFVDGTVTYNLTVTAAGNLTINCTVSNGLGYYTKS
IDISTLLDDITMFKREQREGSEDQTQVVVGIVIGVIVVAVAIGLAYWIYLKRTREGTWKT
GEKENGTLEESKKLEETQSQKAEV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgactgccttttctgcgtgcgtcctcatcatgtccctgctggaccaagtgagt
ggactcacaaccatagtgggcaaatatggtgaaactgttgaagtgccttgcaacaaagga
gacatcaaagtagaggacatcatgatagctaaatggaaatataccaaagcggacggcacc
atcgttgatattctgacaaaatcaaaatctcaggatgcctcgttctacccaattgtggag
tacgaaggcagactcaacctaacaaaggacctcagcctgcaaatttcccaggcaaaaatg
gccgatcagaagactttgacctgtctagtggtggcaggcacagaaatatttgagtatcca
gttcaagtgacaattcagaaggccccttcgccacccgcaatcacaaatcaatccaaagtg
atagagctcggcaagctaacaacgctggcagtatgtactgctaaagatgccagtccatta
gctatcgtcacctggctgaaggacaatgttccgctcgtagctgatgggaaagtggtcaac
atcacactaaatgtgcagacagacaaaaacaccggcctctcgaatacatcttccaagctg
gagtatgccgctacgaaggcagatatgaacgctaagttcacttgttccgtccatcataag
agccttgcctcggacctcgtgtctgctccgatgaccttcgtcatccactaccccagtgaa
aaggtcagcctccaggtcatgtctgcagacccgataaaggagggagacaatgtgaccctg
aaatgtgcggccgatgggaaccccccaccgactagctacaactttcatatcaaggagaag
aaggtgaccacggagaactcggacacgtacacactccataacgtcacccgggccgacagt
ggagaatataagtgctccctggtggacaacgaaggaaagacaggctctactagttttacc
gttatgtacctgcatatcgccgccgtcagccaaggaaagattgctaaaaatttatccgag
agctttgaggcaacgttagaggtgaacgcctctggaaatccacaagtcttgtggacaaag
aacaacgtcagactgaatggtaagcccaagtttgacaagctgaagtactcagactccgga
gtgtacgagtgtgtggtttctgtgggtggacttgtcaaaaaagcatcatttgagctgagc
gtccaaggtgctccagttatcactatgctgactaagtgtggcagtaatggacacaagatt
ctgagctgcaaggctgaaggatcacccaaacccactgtgcagtggagcattaacggcact
aatgccaccgagagttccttcgtggatggaacggtcacatacaatctcacagtgactgca
gcaggcaatctcacaattaactgcaccgtttctaatgggctgggctactacacaaagagc
attgacatatccacattgttggatgacataacaatgttcaaaagggagcagcgggaaggc
tctgaagatcagacgcaagtagtagtggggatcgtcataggcgtaatcgtggttgctgtt
gctatcggtctggcctactggatctacttgaagagaaccagggaaggcacctggaaaact
ggagagaaagagaatggcacactggaggaaagcaaaaaactggaggaaactcagagtcaa
aaagctgaggtgtaa
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