Ictalurus punctatus (channel catfish): 108278395
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Entry
108278395 CDS
T04658
Name
(RefSeq) zinc finger protein neuro-d4
KO
K22198
BRG1-associated factor 45B/C
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108278395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108278395
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108278395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
zf-C2H2
PHD_2
zf-C2H2_4
zf-H2C2_2
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
108278395
NCBI-ProteinID:
XP_017347236
UniProt:
A0A2D0SXJ2
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Position
17:4278139..4318691
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AA seq
411 aa
AA seq
DB search
MKLKLLLTLGPSCTIPGICSSHTFYHSVTKMATAVQNPPKSQSSGTVIKNSLGEEFYREA
IEHCRSYNARLCAERSMRLPFLDSQTGVAQSNCYIWMEKNHRGPGVSPGQLYTYPARCWR
KKKRLNILDDPRLGPIEFKIDYESALKKEGGVPEGPVLESLLSGEPLDKKVETKEEEAMS
ECQKLLVGDFPHEMDVEEMEEDVPKRKNRTKGRACGVGGMRKRQEPASIEDRDKPYVCDI
CGKRYKNRPGLSYHYTHTHLADEEGEEDSERHTLPFQRKNNHKPKKAADGSVIPNGYCDF
CLGGSKKTGCPEDLISCADCGRSGHPSCLQFTVNMTAAVRTYRWQCIECKSCSLCGTSEN
DDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCLRQLKEKASAYIMLN
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgaaattgctgcttacattaggaccttcatgtacaataccggggatctgcagc
tctcacacattctatcattccgtgacaaaaatggccacagcggtccagaaccctccgaaa
tcgcaatcgagtggaacagtcataaagaacagcctgggcgaggagttttatcgtgaggcg
attgaacattgtcgaagctataatgctcgcctgtgtgccgagcgctccatgcgtctgccc
ttcctggactcacagactggcgtggcacagagcaactgctacatatggatggagaagaac
caccgaggcccgggcgtgtctccggggcagctgtacacttacccagctcgctgctggcgc
aagaaaaaacggttaaacatcctggacgatccacgtctgggacccatcgagtttaagata
gactacgagtcggccttgaagaaagagggaggtgttcctgagggtcccgtccttgagtcc
ttgctcagcggagagcctttagataagaaagtggagacaaaggaggaggaggccatgagc
gagtgtcagaagctgctggtgggagactttcctcatgagatggacgtggaagaaatggag
gaggacgtgcctaagcgcaagaaccgcaccaaaggacgggcttgcggtgtaggaggaatg
aggaagaggcaggaaccggcctccatagaggacagagacaagccatacgtttgtgacatc
tgcggtaagcgctacaagaaccgcccgggtttgagttaccattacactcacacacacctg
gcagacgaggagggtgaagaagactcggaacgacacactctaccctttcaacgcaagaac
aaccacaagcccaaaaaagcagcagatggctcggtcatccccaacggctactgtgacttc
tgcctcggaggctcgaagaagacgggctgcccagaggatcttatctcctgtgcagactgc
ggacgatcaggccacccgtcctgcctgcagttcacagtcaacatgacggcagcagtgagg
acttaccgctggcagtgcatcgagtgcaagtcctgcagcctgtgtggcacctccgagaac
gacgatcagcttttattctgtgatgactgcgatcgaggatatcacatgtactgtctaagt
ccacctatggcagaacctccagaggggagctggagttgtcacctgtgtctgcggcaacta
aaggaaaaagcctctgcttacatcatgctgaattaa
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