Ictalurus punctatus (channel catfish): 108278440
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Entry
108278440 CDS
T04658
Symbol
trpc2b
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108278440 (trpc2b)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108278440 (trpc2b)
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Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
Ion_trans
TRP_2
PKD_channel
Ank_2
Ank
Motif
Other DBs
NCBI-GeneID:
108278440
NCBI-ProteinID:
XP_053543940
UniProt:
A0A9F7RJ48
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Position
18:14898747..14929079
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AA seq
1332 aa
AA seq
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MAPVRIKHVVSFTSEDPKHRVVNLCSGGGGSGPWLCSTAERSGLLKAELQLDRASTIAFI
DVGNHGSAFIQVDVGRSSWSIDHPYVTLLPTATLMNPADSRQGTGKHSVRMFKKGDFLPQ
AAEESWDRLRVTCSQPFNKRNQFGLSFFRVRTADEHTEEPSANQENPTTKNQRTPDKILS
VREWISSPPVQHTFFGQKRGESSPGEPTKDHGKLSRAERMVTAAQSIRRSLHNTSCNVLI
SSSNRQEKTQNTQHGPARTPQARRRKSETMREQASMSSTPKRSRCSTSDVTATKKKKDAF
RRSPVKSHMPATSPPKNSPVYPEPPETVCPICGVSFSPDCLPLHASSCLDSGSVDFSSVM
ETETESSFSFRPPSGPSTDELVVPCPLCSFRFPIDCIQQHASTCGDTVWVDYIAFALLIS
TSQPVQWREIVNKKMLFPPELISAIHEGNVAGIRSLLKTGDGIIRQLEESEDRQWREALN
LSIRLGNEDTMVTLLHGVKFDFRQIHEALLVAVDTNQPRIVKRLLDRLDQEKGNKMDVHS
FNQAIFDHSIDDSQFAPGVTPLTLACQKDRYDIVTMLTQKGHVIPWPHKVSCSCLECRNG
RQYDLLKFSLSRINTYRGLASRAYLSVTTEDAMLSAFYLSRDLRKLSKREPEFKPQYLAL
EELCQEFAVELLGMCRNQSEVTTILNDCGIKDADSQEELEKHSFEEGIPNLARLRLAVNY
NQKQFVAHPICQQVLSSIWAGNLSGWRGSRTAWKLLVSVGIFVTMPILCLIYWIAPKSKV
GKILKIPAIKFILHSASYLWFLIILLAESIIMEMFRDASSTRNQTILQNSIHMVWVAGFF
WYECKEVWIEGLRSYFLDLWNCLDVIVLSMYLASFALRVVVLVKGYIVCQQPESAECFYF
TQSARQDWLQEDPQIIAELLFAVTSMLSFTRLAYILPAQESLGTLQISMGKMIDDMMRFL
FILMIIGTAFLCGINNIYVSYAESQYLGRFNETFQFLFWTMFGVVNKEYVDMPEHDLAQF
VGRILYGIFTLLIVIVLLNMFIAMITNSYQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAFFYLIRKLCCWCNFNSAPDYPPIGSVSNETDEKVSYRNQVIRALVQRYID
SARREFEETKRKDIGNRVTELNKVVGHLHGEMKQIHQTLIDMGENRLDPSERSTSSIIGK
YIQGAKNNFRDFNSVVPSESKSVPLLANIHQMKSEDEGDVNGEELNGTEETFDKGKIEEE
GAGDETMEQEGKDQTGDGADESNDQSAVEDETTKMEEGRADAGIEEPLTGSSGSQDTGFG
SEESELSASSPE
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagttagaattaaacatgttgtctcgttcacgtcagaggacccgaagcaccgt
gtggtgaacctgtgctctggcggtggaggaagcggcccgtggctgtgtagtacagcggag
cggagcggccttcttaaagccgagctgcagctggaccgggcttctaccatcgcctttata
gacgtgggaaaccatggctctgcgtttattcaggtggacgtggggcgctcttcatggtct
atagatcatccatatgtcacacttctgcccactgcgaccctaatgaacccagctgattca
cgacaaggcacaggaaagcacagtgtgcgtatgttcaaaaaaggtgatttcttgccccag
gctgctgaagagagctgggacaggctgagggtcacgtgcagtcagcccttcaacaagcgc
aaccagtttggcctgtctttctttcgtgtccgcactgctgatgaacacactgaagagccg
tctgccaatcaggagaaccccactaccaaaaatcagcgtacaccagataagatcttgtcg
gtaagagagtggatctccagccctcctgtacaacacaccttctttggccaaaaaagagga
gaaagctctccaggagagcccacaaaggatcatgggaaactgagcagggcagagcgcatg
gtaacagctgcacagtcaatcaggcgctctctacataacacctcctgcaatgttttaatc
agcagtagcaatagacaggagaagacccagaacacacaacatggtccagccaggactcct
caggcacgcaggagaaagtcggaaacgatgcgcgagcaagcaagcatgtcctctactcca
aagaggtccagatgtagtacatcagatgttactgccaccaagaagaaaaaggatgcattc
agacgcagccctgttaaatctcatatgccagcaacatcaccaccaaagaacagcccggtt
tatcctgaacctcctgagactgtatgcccaatatgtggagtgtctttcagcccggactgc
ttgcctcttcatgcttcttcctgtctggattctggttcagttgatttctcaagtgtcatg
gagacagaaactgagtcatctttttcctttcgtccaccttctggtccaagcacggatgag
cttgtggtgccatgtcctctgtgctccttcaggttccctatagactgtatccaacagcat
gccagtacctgtggtgacactgtgtgggtggattatattgcttttgcattgttgatttct
acctcccagccagtgcaatggcgcgagattgtgaacaaaaagatgctcttcccccctgag
ctcatcagcgccattcacgaggggaacgtggctggaatccgtagcctgctgaagaccggc
gatggcatcatccgccagctggaagagtctgaagacaggcagtggagagaagcactgaac
ctgtccatccgcctgggcaatgaggacaccatggttactctgctacatggagtcaagttt
gatttccgacaaattcatgaggctcttttggtggctgttgacactaaccagccacgtatt
gtgaagcgcctcctcgaccggctcgatcaggagaaaggcaacaagatggatgtgcactct
ttcaaccaggccatttttgaccattccattgatgattctcagtttgctcccggggtgacg
ccgttgacgctggcctgccagaaggaccgctatgacattgtgaccatgctcacacagaag
ggccatgtcatcccatggcctcacaaggtctcctgtagttgtctcgagtgccggaatggg
cgccagtatgacttgctcaagttctcactgtcacgcattaacacttaccgtggccttgcc
agccgggcatacttgtccgtcactaccgaggatgccatgttgagtgctttttatctaagc
cgggaccttcgcaaactctctaaaagggagccggagtttaagccacagtaccttgcactc
gaggagctgtgtcaggagtttgctgtggaattactgggaatgtgccggaaccagagtgag
gtcaccaccattctcaacgactgtgggattaaagatgccgacagtcaagaagagctggaa
aaacactcattcgaagagggcataccaaacctggcccgattacgactcgccgtgaactac
aaccagaaacagttcgtagcccacccaatctgccagcaggttctttcatccatctgggct
ggaaacttatctggctggagaggcagcaggacggcctggaaactcctggtctcagtgggg
atttttgtcaccatgcctattctctgccttatttactggattgcaccaaagtcaaaggtc
ggaaagattttgaaaattccagcaatcaaattcatccttcactctgcctcctacttgtgg
ttcctcatcatactgttagcggaatccataatcatggagatgtttcgtgacgcatcttca
accaggaaccagaccatattgcagaactctatccacatggtgtgggtggctgggtttttc
tggtatgagtgtaaggaggtctggatcgagggcctgaggagctacttcctggacttgtgg
aactgtctggatgtgatcgtgctcagcatgtatctggcctcttttgcactgcgggtggtc
gttctggttaaaggctatattgtgtgccagcaacctgaaagtgcagagtgtttctacttt
acccagtctgcacgtcaagactggcttcaggaggaccctcagataatagctgaattgctc
tttgctgtcaccagcatgctgagtttcacacgtttggcctacatcctgcctgcgcaagag
tctctgggaaccctgcagatctctatggggaagatgattgatgatatgatgaggttcttg
tttatactgatgatcattggtacagcctttttgtgtggcatcaacaatatctatgtttct
tacgccgaatctcaatatcttggaaggtttaatgagaccttccagttcctgttctggaca
atgtttggtgttgtcaataaggaatatgtggacatgcctgagcatgatttggctcagttt
gtgggcagaatcctgtatgggatcttcacactactgatcgtcattgtgctacttaacatg
tttattgctatgatcacaaactcttaccagaagattgaggatgatgcggatgtggagtgg
aaatttgctcgctccaaactgtatctgagctacttcagggagggactcacgatgcctgtc
cccttcaacattattccctcaccaaaagctttcttctacctcataagaaaactctgctgc
tggtgcaactttaattcggctccggactatccacctatcggctctgtgtctaatgagaca
gatgagaaggtgtcgtacagaaatcaggtgatccgggctttagtgcagcgttatattgat
tctgccagaagagagtttgaggagacgaagcgcaaagatattggaaaccgggtcacagag
ctgaataaagtggttggacacctgcatggtgagatgaagcaaattcaccagacactgata
gacatgggggagaaccgactggatccctcagaacgtagcacttcctccatcatagggaag
tacatccagggcgccaaaaacaacttccgtgactttaacagcgtcgtaccttcagaaagc
aaaagtgtccctttgctggccaacatccaccagatgaaatctgaagatgaaggcgatgtg
aacggagaggagttaaacggcacggaagagacttttgataaaggtaagatagaggaggag
ggagcaggtgatgagaccatggaacaggagggtaaagatcagactggggatggagccgat
gaaagcaatgatcagagtgcagttgaagatgaaacgacgaagatggaggaggggagagcc
gatgcaggaatagaagaaccactaaccggcagcagtggctctcaggacaccgggtttggt
tctgaagaatcagaactctccgctagcagtcctgagtaa
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