Ictalurus punctatus (channel catfish): 108278460
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Entry
108278460 CDS
T04658
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108278460
04082 Neuroactive ligand signaling
108278460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108278460
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108278460
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF1459
Motif
Other DBs
NCBI-GeneID:
108278460
NCBI-ProteinID:
XP_017347345
Ensembl:
ENSIPUG00000010510
UniProt:
A0A2D0SYD6
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Position
18:24156450..24272884
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AA seq
476 aa
AA seq
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MAGAPDKLAVLASCIWIFLMLLEPSLQNGAVAGHREPLPDDSKDNITIFTRILDRLLDGY
DNRLRPGLGESVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLPL
NNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDF
PMDAHACPLKFGSYAYTNNEVVYIWTADDEKSVSVAPDGSRLNQYDLLGHVIGKETISSS
TGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGQKENQEK
RRESASLSKKTNNTFNIVGTTYPMSVGKEPGLTTIAKSASSTASAPAQPQPVREVRLSRM
DGEYICEGVKKSYNRVSKVDKISRIIFPVLFFIFNLAYWATYVNRKPTIRRSNPHN
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgctcccgacaagcttgccgttcttgcgtcgtgcatatggatattcctaatg
ctcctcgaacccagcctgcagaatggggccgtcgcagggcacagagagcctcttcctgat
gacagcaaagacaacatcaccatttttactcggattctggaccgcttgctggatggctat
gacaacaggctgcgcccgggtctcggagagagcgtgactgaagttcggaccaacatctac
gtcaccagtttcggaccggtatcggatacagacatggagtacaccatcgacgtgttcttt
cggcagagctggagggacgagaggctgaagttcgacggacccatgcaggttcttcctctc
aacaaccttctggccagcaagatctggactccggataccttcttccacaacgggaaaaag
tcggtggctcacaacatgactactcctaataaactcctgcgtctggtggacaacgggacc
ctgctgtacactatgagattaactattcatgctgagtgccccatgcatctggaagatttc
cccatggatgctcacgcctgcccgctcaagtttggaagctatgcttacaccaacaacgag
gtggtctacatctggactgcggatgatgagaagtccgtgtccgtggctccagatggctct
cgtctcaaccagtatgacctgctgggacacgtcataggcaaagagaccatcagctctagc
acaggagaatatgtggtgatgacaacttattttcatctgaaaaggaaaatcggctatttt
gtcattcagacgtatttaccctgcatcatgaccgtcatcctttcccaagtctcgttctgg
ctcaaccgggagtcggttccggcgcgtaccgtcttcggagtcaccactgttctgaccatg
accacgctaagcatcagcgctagaaactctctacccaaagtggcctacgctacagctatg
gactggttcatggccgtgtgttacgccttcgtcttctctgccctcatcgagtttgccacc
gtcaactattttaccaagcgcagctgggcctgggacggtcagaaggagaaccaggagaag
agacgtgagtccgcgtcactctccaaaaagaccaacaacacctttaacatcgtgggcact
acttatccgatgagcgtgggaaaagaacccggactgaccaccattgctaagagcgcttcc
agcacggcctcagccccggcccagccccagccggtccgagaggtgcggctgtccagaatg
gacggcgagtacatctgcgaaggcgtcaagaagtcctacaaccgagtcagcaaagtggac
aagatctcacgcattatctttccggtgctcttctttatcttcaacctggcctactgggcc
acgtatgtcaacaggaagccaaccattaggaggtccaacccccataactga
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