Ictalurus punctatus (channel catfish): 108278464
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Entry
108278464 CDS
T04658
Symbol
htr1ab
Name
(RefSeq) 5-hydroxytryptamine (serotonin) receptor 1A b
KO
K04153
5-hydroxytryptamine receptor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108278464 (htr1ab)
04082 Neuroactive ligand signaling
108278464 (htr1ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
108278464 (htr1ab)
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Biogenic amine
Serotonin
108278464 (htr1ab)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
108278464
NCBI-ProteinID:
XP_017347350
UniProt:
W5UDR3
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Position
18:21132478..21134139
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AA seq
417 aa
AA seq
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MNRDMDETENASSLFQNDSNLEDQNDKVSLTAKVPLSYQIPTSMLIGALILCSVFGNACV
VAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMACLYQVLDKWTLGQVACDIFISLDV
LCCTSSILHLCAIALDRYWAITEPIDYMKKRTLKRAAVLIGATWLVGFLISVPPMLIMKS
QPKSKAEGMANPEACAISHDPWYTIYSTFCAFYIPLILMLVLYGRIFKAARFRIRKTVRR
TEKKKVTCLTVSPALFKRSNGEPGKSWRSSVEPKPASCVNGAVKHTDDGESVEILEVHGN
SKHELPLPNTPSSAPLFENRHEKNTEAKRKLALARERKTVKTLGIIMGTFILCWLPFFIK
ALVMPFCPSCEMPVWLQDVINWLGYSNSLLNPIIYAYFNKDFQSAFKKIIKCHFCRK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgacatggacgaaacagagaacgcgtcttcgttgttccaaaacgacagcaat
ctagaggaccagaatgacaaagtgtcgctgacagcaaaggtgccgttgagttatcaaata
ccgacgtctatgctgatcggcgcacttatcctgtgctcggtgtttggaaacgcgtgcgtc
gtggcagccatagctttggagaggtcactccaaaacgtggccaactatctaatcgggtct
cttgccgtgacggaccttatggtgtcggtactcgtcctgcctatggcgtgcctctaccaa
gttttggacaaatggacactcggacaggtcgcatgcgacatctttatctcgttggacgtt
ctgtgttgcacgtcttcgattttgcatttgtgcgccattgcgctggaccggtactgggcg
atcaccgagcctatagactatatgaaaaagaggacgctgaaacgcgcggcggttctgatc
ggcgctacatggctggtgggcttcttgatatccgttcctccaatgctgatcatgaaatcg
cagcccaaaagcaaagcagaaggcatggccaaccccgaagcgtgcgccatcagccacgac
ccgtggtacaccatttactcaacattctgcgccttttacatcccgctcatcctcatgctc
gtgttgtacgggcgcatcttcaaagcggcacggtttcgtattcgcaagactgtacgcagg
acagagaagaaaaaagtcacgtgcttgactgtgtctccggcgctttttaagcgctccaat
ggagagccgggtaaaagctggaggagcagcgtggagcccaagccggcgtcgtgcgtcaac
ggcgcagtgaagcacacggacgacggcgagtctgtggagatcttagaggttcacggcaat
tcaaagcacgagctgcctttgcctaacacaccgagctcggcgccgctgttcgagaaccga
cacgagaaaaacacggaggcgaagaggaaactggcgctggcgcgggagcgcaaaactgtc
aagacgctgggcatcatcatgggcacgttcatcctgtgctggctgccttttttcatcaaa
gccctggtgatgcccttctgcccgtcgtgcgagatgcccgtgtggcttcaagacgtgatc
aactggctcggctactccaactccctgctcaaccccatcatctacgcatacttcaacaag
gacttccagagcgccttcaaaaaaatcatcaaatgtcacttttgtcgaaaataa
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