Ictalurus punctatus (channel catfish): 108278475
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Entry
108278475 CDS
T04658
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
ipu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108278475
04082 Neuroactive ligand signaling
108278475
04519 Cadherin signaling
108278475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108278475
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108278475
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
108278475
NCBI-ProteinID:
XP_017347364
Ensembl:
ENSIPUG00000016801
UniProt:
A0A2D0SXF4
W5UGR0
LinkDB
All DBs
Position
18:complement(8768005..8851682)
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AA seq
524 aa
AA seq
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MAIFRRRRKWSWVRICVLFVMVAAVWAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGG
PPVRVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWV
PDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLE
IESYGYTTDDIEFYWRGENSAVTGVERIELPQFSIVDYKLIAKKVVFSTGAYPRLSLSFK
LKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLP
KIPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFGQGPQRQKKAAEKASNANNEKMRMDS
NKWLMGNVVQRNDALYARMKPRDIDAHDSMWEPIFVDDAAIGLGDQKNKMDPHENILLTP
LEMKNEMSPPELALGLGDPRGTMLAYDSSALQYRKAGLARQNFGRNALECHVPQKKSRLR
RRASQLKITIPDLTDVNSIDKWSRMIFPTVFSFFNVVYWLYYIN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttttcggaggaggagaaaatggagctgggttcggatttgtgttttattcgtg
atggtggctgcggtttgggcgcaaagtgtgaatgatccgagcaatatgtctctggtgaag
gaaactgtggacagactgcttaaaggatacgacatccggctcagacccgatttcggaggt
cctccagtgagagtgggtatgaacatcgatatcgccagcatagacatggtatcagaagtc
aacatggactacaccctgaccatgtacttccagcaggcatggcgagataaacgcctctca
tactcggagatccctctgaacctcacgttggataatcgggtggctgatcagctgtgggtc
ccggatacgtacttcctaaatgacaagaagtccttcgttcatggtgtgacggtgaaaaac
aggatgatccgcctccacccggacggcacggtgctctacggtctgaggatcactacaacc
gcagcctgcatgatggacttgagacgatatccactggacgaacaaaactgtactctggaa
atcgagagctacggctacacgacggatgatatcgagttttactggcgaggtgaaaacagc
gccgtgacaggagtggagagaatagagctgcctcagttctccatagtcgactacaagctc
atagccaagaaggtggttttctctacaggtgcttatcctcgcctgtccctcagcttcaag
ctgaagagaaacatcggctacttcatcctgcagacctacatgccctccatcctgatcacc
atcctgtcctgggtctccttctggatcaactacgacgcctccgccgcccgagtcgcttta
ggtatcacgaccgtgctcaccatgacaaccatcaacacacacctgcgagagacgcttcct
aaaatcccgtacgtcaaagccatcgacatgtacctgatgggctgcttcgtcttcgtcttc
ctcgcactgctcgagtacgctctcgtcaactacatcttcttcggacaaggacctcagcgg
cagaagaaagcggcggagaaagcgtccaacgccaacaacgagaaaatgaggatggattcc
aacaagtggttgatgggaaatgtagttcagagaaacgatgctctgtatgccagaatgaaa
ccgagggatattgacgctcatgactcgatgtgggaaccgatctttgtggacgatgcggcg
ataggactaggcgatcaaaaaaataagatggaccctcacgagaacatcctcctcacgcct
ctggagatgaagaatgagatgtcgccgcccgaattagctcttggtctcggcgaccctcgc
ggcaccatgttagcgtatgacagctcggcgctacagtaccggaaagcgggactcgctcgg
cagaacttcggacggaacgcactggaatgtcacgtccctcagaagaaaagtcgactgcgg
agacgtgcctcgcagctgaagatcaccatccccgacttgactgacgtgaactcgatcgac
aagtggtcgaggatgatcttccccaccgtcttttcctttttcaacgtcgtctactggctt
tactacatcaactga
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