Ictalurus punctatus (channel catfish): 108278497
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Entry
108278497 CDS
T04658
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108278497 (gabra6b)
04082 Neuroactive ligand signaling
108278497 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108278497 (gabra6b)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108278497 (gabra6b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
108278497
NCBI-ProteinID:
XP_017347410
Ensembl:
ENSIPUG00000016689
UniProt:
W5UAL1
LinkDB
All DBs
Position
18:8862354..8889652
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AA seq
443 aa
AA seq
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MALIHTLILLSCAGKVWSKSGPNESRVYLNNITRILDRLLDGYDNRLRPGFGGPVTEVKT
DIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLRFEGPIKILRLNNLMVSNIWTPDTFFRN
GKRSIAHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLINFPMDGHSCPLKFGSYAYP
MSEIVYTWKKGPLFSVEVPPESSSLLQYDLIGQTVSSEKLKSSTGEYIVMTVHFHLQRKM
GFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFSTVQANREHRRANAVQAAMATAAKSDSIDVTSL
VDSSSVLKKRLNSVPQKESSMVPASPVHELRQQGSATPDNAMLTGTSIIDKYSRILFPLS
FGAFNLVYWIVYLTKDPMETREE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctctcatacacactctcattctgctctcatgtgcggggaaagtttggtccaaatcc
ggcccgaatgagtctcgagtctatctgaacaatatcacacggattctggacagattactg
gatggatacgacaacagactgagaccaggatttggaggtcccgtcacagaagtcaaaacg
gacatcttcgtcaccagcttcggtcccgtgtctgacgtggaaatggagtacaccatggac
gtgtttttccgccagacatggatagacgagcgtctaaggttcgagggtcccatcaagatc
ctgcgtctcaacaacctgatggtcagcaatatctggactccggatacatttttccgaaac
ggcaaacgctccatcgctcacaacatgacaactccgaacaagctgttccgtatcatgcag
aatggaaccatcctctacaccatgagattaaccatcaatgccgagtgtccgatgagactc
atcaacttccccatggatggacattcctgtcctctgaagtttggcagctacgcttacccg
atgagtgagatagtgtacacttggaagaaagggcccttattttctgtggaggtgccaccg
gagtcgtccagcctgctgcagtacgacctgatcggacagacggtgtcgagcgaaaagctc
aagtccagcacgggtgaatacatcgtcatgaccgttcacttccatttgcagaggaagatg
ggtttcttcctgattcagacctacatcccctgcatcatgaccgtcatcctcgctcaggtt
tccttttggatcaacaaagagtccgttcctgccaggaccgtcttcggcatcactacagtg
ctaacgatgacgactctgagtattagcgctcgacactcgctgcctaaagtctcctacgcc
accgctatggactggttcatcgccgtgtgcttcgctttcgtcttctccgccctcatcgaa
tttgccgccgtgaactacttctctaccgtgcaggccaaccgagagcaccgccgtgccaac
gctgtccaagctgccatggcaaccgccgccaagagtgacagcatagatgttacgtcgctg
gtggactccagcagtgttctgaaaaaaaggctgaactcagtgccgcagaaggagagctcc
atggttcctgcgagcccagtgcatgagttacgtcagcagggttcagccacgcccgataac
gccatgctaactggcaccagcatcatcgataaatactcacgcatcctcttccctctgtcc
ttcggcgcctttaacctcgtttactggatcgtttacctcaccaaggaccccatggagaca
agggaggagtga
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