Ictalurus punctatus (channel catfish): 108278510
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Entry
108278510 CDS
T04658
Symbol
msx2b
Name
(RefSeq) homeobox protein MSH-D
KO
K09341
homeobox protein MSX
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108278510 (msx2b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
108278510 (msx2b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
HTH_NDX
Homeobox_KN
Gliadin
Motif
Other DBs
NCBI-GeneID:
108278510
NCBI-ProteinID:
XP_017347433
Ensembl:
ENSIPUG00000012867
UniProt:
A0A2D0SXM3
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All DBs
Position
18:complement(25136700..25139555)
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AA seq
221 aa
AA seq
DB search
MEQRKAQAPTLSFSVESLIACEKSIKERRKSSEYPFVQSQVSSHQNTENVRQHCVQTSFV
KSESPEPEDLEAAWVTNSAYSHTRQVSPQCTLRKHKSNRKPRTPFTTAQLLALERKFHQK
QYLSIAERAEFSSSLTLTETQVKIWFQNRRAKAKRLHEAELEKLKLATKSPLTSGPSFFD
VALPVGQPLFSNSFPYQRPLVPVSPLGVYGTPLGYGLYHLA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacgcaaagctcaggctccgactctttccttcagcgtggagtcgcttatagcc
tgcgaaaaaagcatcaaggagcggcggaaaagttcggagtatccgttcgtacaaagtcag
gtttcatcgcatcaaaacacggaaaatgtccgacagcactgtgtccaaacttcattcgtc
aaatcggagtctccggagcctgaggatttagaggctgcctgggtaactaactctgcgtat
tcacacacacggcaggtgagtccacagtgtacactgcgcaagcacaagtccaaccgcaaa
ccacgcacaccttttaccacagctcagctactggcacttgagcgcaaattccaccaaaaa
caatacctgtccattgctgagcgtgctgagttttccagctcactcacacttacagagact
caggtgaagatctggttccagaaccgccgtgccaaggccaagcgacttcatgaggctgaa
ctcgagaaacttaaactggctactaaatctccactgacatcaggtccatccttttttgat
gtggcactgcctgttgggcagccactcttcagcaactcgtttccttaccagaggcccctg
gtgcctgtttcgccactcggagtatatggaacacctcttggatatggcttgtatcacctg
gcatga
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