Ictalurus punctatus (channel catfish): 108278528
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Entry
108278528 CDS
T04658
Name
(RefSeq) piRNA biogenesis protein EXD1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108278528
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108278528
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
108278528
NCBI-ProteinID:
XP_017347462
UniProt:
A0A2D0SXQ6
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Position
18:19311508..19315406
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AA seq
482 aa
AA seq
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MVSLEHYQFLESFKRKRIRLTTKGSTFEGVVQRINLNKTIILEDVVEVQSNSRFLGAKLF
FGQEILNIEFTSSSNRDLLGDEDHEKVGQLSLAEYQPYRSTLLGDGDGDDEEDEQFVNYM
VVDEFHEKFGPALMHIRKQRVIGLGLDGVGAFQNERLCWLQVATKNKVYLFDILLLGARA
FRNGLSNILGSENILKVMHDCRRISGCLMVQFGVKLTNVFDTQVADVMHFYTETGGFLPT
RVSTLQEVITGHLKMPLYRLSSLNIKDQLCREDKEVWYIRPCPAPLLKVMALSVIHLQPL
RLMLLDALMSDYTSLVDTYLKTGQENPLCTLDFGKTGLELPQELREIEVIKCDRRKWAVD
HYNITEDGLLDRYNVKPTSEPDSEIREQPEILDSSLDAAEKCPCPAEKSTLRGGSVPDKD
VTTMPNIGRGFVLPAPVVPFRENALLQKSTAETGPVSIMGGVAQNGACSVPVMGRGLFNR
SL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctttggagcactatcagtttttagagagctttaaaaggaaacgcatccgactt
acaacaaaaggcagcacatttgagggcgttgtgcagcgcattaatttgaacaaaactatc
attttagaggatgtggttgaagttcagagcaacagccggtttctcggagctaaactcttc
ttcggacaagaaatcctgaatattgagtttacttcctcctctaacagagacctcctgggt
gatgaggatcatgagaaggtgggtcagctgagcctggctgagtatcagccctacaggagc
acgctgttaggtgatggagatggtgatgatgaggaggatgagcagtttgtgaactatatg
gttgtagatgagttccatgagaagtttggacctgcactgatgcacatccggaagcagcgg
gtgatagggcttgggctggatggagttggtgctttccagaatgagaggctctgctggctg
caggtggcgactaaaaacaaggtgtatctctttgacatcctgttgctcggagctcgagct
tttagaaatggtttgtctaacattctggggagcgagaacatcctgaaagtcatgcacgac
tgccggaggatctctgggtgtctgatggtgcagtttggcgtgaaactgacgaacgtgttt
gacacgcaagttgctgatgtcatgcacttctacacagagacagggggcttcctgcccaca
cgggtgagcacgctccaggaggtcatcaccggtcacttaaaaatgccgttataccgtctg
tcctctctgaacatcaaggatcagctctgtagggaagacaaagaagtctggtacatccgt
ccttgccctgcgccgctcctaaaagtcatggcattgtctgtgatccacctgcagccgctt
cgtcttatgcttttggacgccctgatgtctgactacaccagtctggtggacacctatcta
aagaccggtcaggaaaaccctttatgcacattggacttcggcaagactggcctcgagctc
cctcaggagctgcgtgaaattgaggtgatcaaatgtgatcggcggaaatgggctgtggac
cactataacatcacagaggatggacttctggaccgctacaacgtcaagccgacttcagag
ccagactcggagattcgggaacagccggagatcctggattccagcctggatgctgcagaa
aagtgtccctgtcctgctgaaaagtcaacactaagaggaggaagtgtgccggataaagat
gtcactactatgccaaatatagggagggggtttgtacttcctgccccagtagtacccttc
agagaaaatgcgctactccagaaaagcactgcagagacggggcccgtctccatcatgggg
ggcgtagctcaaaatggcgcctgttcggtacccgtcatggggagaggactctttaacaga
tcgttgtag
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