Ictalurus punctatus (channel catfish): 108278546
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Entry
108278546 CDS
T04658
Name
(RefSeq) transcription factor Sox-14-like isoform X1
KO
K09271
transcription factor SOX15/30
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108278546
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108278546
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
108278546
NCBI-ProteinID:
XP_017347483
UniProt:
A0A2D0SXR8
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Position
18:complement(21787327..21796242)
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AA seq
391 aa
AA seq
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MLRHLKRRAQISFKKLEEQQTLLKEDNKTIKTLEYGKLLEAEHGRNEFPTQEGETVPVDK
TDNTVNTPASPAPVRSCKEVSSSCSFHPELEPRFTVAHAESVTPVTPVTRSVEAATEGVS
FPQLPSGTDDYNTTNYKNRKGYIKKPMNAYMVWVRTQWSISCKANPNASFAEIGMLLGNG
WRNLSEEQKKPYYAEARRLKQKHRKKFPDCVHNAETRKRFSPEVAPLDTTSNASPTAPLA
HPQRSAPQNIPVASPRNSSLQYSAMQTNPMFSVMDMPREVPLHGLVSGSRGQFPDLAHSQ
VPLSPRCPMLLPFCSTILHVWAAILPDQVSRIMPAVESLGQKHTATTPRTAQTFLTSVPV
QDIHALEKLFNNLTRRNNVSEEEDSGEIQML
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgctccgacatctcaaacgaagagctcaaatatcattcaagaaactggaagaacagcag
actttactaaaggaagacaacaagaccatcaaaaccctcgagtatggaaaacttctggaa
gcagaacacggcagaaatgagtttccaacccaagaaggtgaaacagtcccggttgataag
acggataataccgttaacacacctgcttctccagctccagtgaggtcctgtaaagaagta
agttcctcttgcagtttccatcctgaactggagccgcgtttcaccgtcgcgcacgcggag
tctgtcacacctgtcacacctgtcacgcgcagcgtcgaagcggctacagagggcgtgagc
ttccctcagcttccctcaggaacagatgattataacacaacaaactacaaaaatagaaaa
ggctatatcaagaagcccatgaacgcctacatggtttgggtgaggacacagtggtctatc
tcgtgcaaggccaacccgaatgccagctttgcagagatcggcatgctacttgggaatggg
tggagaaacctgagtgaagaacagaagaaaccctactacgcagaggcacggaggcttaaa
cagaaacacagaaagaaatttcctgattgtgttcataatgctgagacgagaaagagattc
agcccagaagtggcacctctggacactacctctaatgcctcaccaaccgcacccctggca
catcctcagagatctgcgcctcagaacatccctgtagcatcacccagaaactccagcttg
cagtactcagccatgcagaccaatccaatgttctccgtcatggacatgccaagagaagta
ccactccatggcctggtgtctggatctagaggacagttccctgaccttgcccactcacaa
gtaccactgtctcctcgttgccccatgttgcttcccttttgttccaccattctacatgtc
tgggctgccattctgccagaccaggtaagtcggattatgcctgctgtagagagcctgggg
cagaaacacacagcaacgacacctagaacagcacagacgttcctgacttctgtaccagtc
caggacatacatgccttggagaaattgttcaacaaccttactcggaggaacaacgtttca
gaagaggaagacagtggtgaaattcaaatgctttag
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