KEGG   Ictalurus punctatus (channel catfish): 108278662
Entry
108278662         CDS       T04658                                 
Symbol
ubap2a
Name
(RefSeq) ubiquitin-associated protein 2a isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108278662 (ubap2a)
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108278662 (ubap2a)
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    108278662 (ubap2a)
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108278662 (ubap2a)
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 UBA_RAD5A GIP1_N UBA_8 Methyltransf_32
Other DBs
NCBI-GeneID: 108278662
NCBI-ProteinID: XP_017347610
Ensembl: ENSIPUG00000011116
UniProt: A0A2D0SZ45
LinkDB
Position
18:complement(4889036..4905713)
AA seq 1181 aa
MMTSLGGDRARSTREKVLPTSTQTTQPQKQLQATAEQIRLAQMIYDKNDADFEDKVNQLM
EVTGKNQDECMVALHDCNEDVNRAINFLLEGTSDTTSWETVGKKKSLGKDGISSESKENK
ENREKKGEKESTKARGGANRRGKVASRNRPARVEENGVDSAPVEKGADRGRRGKGRVSGG
RGRGRAPGASRFTAQGMGSVWTFNPADYTMDSGTTNSHADVWESGTNDATDGTVAWRNTL
EDWAAEDWTEDVSLSETKVFTSSCAAPPAENHHITPGQSLDLASLLQKPAGREESENPKP
ASSQGLGHSLVFTNSHHQPTRNGGSAATGSTSYAHATLSSVLGSGFGELGGPKLGQTAGQ
QILEQLKGPGLGQLTSQPPSSGDDRDPVGGLGGTGMPVPSSSWDIKPPGTQSSASLPSQF
SREFKMQPEPSSVLSQLSQRQQSSLSNTGSLPLARQPSPLAQNGPSAIQAPPEAFSKAPE
PSQTHAAPPQTTDSQVSGTQHRQIKTQKRRIAPTSKIPSTAVEMPGSADVSGLNVQFGAL
DFGSESALPEFGQPESCNSEATREATVPVPQTQSSLYSKPVSSESLASTVPLLLPPLASS
DSIYPPPSVLPSLAPSTLTTPSANSVSTSTSSSSSSSSSSSVASSAGNSFDCGVAPHSRL
TFSQSKESSGPVTNGFNGVRTSAALDSTSSSSTPKPESPSLGGSTSVALPSAPLSLLPPS
VTPHSSTLSSLAPELPSATLSSLSSSHVSSGHSSVSALGTSSSLTYTNVDSVNSLAASSA
AFSSVSVSALSGNNGVSSAVSSSLHSAVLGLSGNGTTAPSAIRTAPLLSSSTGKAPPNLS
QGVPPLLPNQYIMGPGGLLPAYPQIYGYEDLHMLQSRLPMDYYGITFPGPTATLSGRDGN
LANNPYSGEVTKFGRGDSTSPAPPTTLSAAHAPQAAQPPQAQSQGQSQPQPQGHHSTQQA
FLNPALPPGYSYTGLPYYPGVPGMPSAFQYGPTMFVPPASAKQHGMGLSNPSTPFQQPGG
YSQHTFSSGYDDLTQGPAGAEYSKGYSNSSQTQAKSAASGPGKGVSVTSSNSGVPDISGT
VYNKTQSFDKQGFHAGTPPPFNLPSALGGTGPLNPGGAPGYAPGPFLHILPAHQQPHSQL
LHHHLTQDGQGGPNQRNQSSSMQQKTQVNKSSYGSSPYWGN
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgatgacctcgctgggcggcgaccgagcccggagcactcgggagaaagtgctgcccaca
tccacacagaccacacagccacagaaacagcttcaggctacagccgaacagatccgactc
gcccagatgatttacgataagaacgatgcagattttgaagataaagtcaatcagctcatg
gaggtgacaggaaagaaccaggatgagtgcatggtcgctcttcatgactgcaatgaggac
gtcaacagagccatcaacttcctgttggaggggacctctgacacgacctcttgggagacg
gtgggcaagaagaaaagcctgggaaaggacggcatttcctcagagagcaaggagaacaag
gagaatcgagagaagaaaggcgagaaagagagcaccaaggctcgcggaggagcgaaccgg
agaggaaaggtggccagtcgtaatcgtccggcgagggttgaggagaacggagtggattcc
gcaccggtggagaaaggagctgaccgcggccgcagggggaaaggacgagtgtctggaggc
agggggagaggccgggccccaggggccagcaggttcacagcacagggaatggggtcagta
tggacctttaacccagcggactacactatggacagtggcacgaccaactcacatgctgac
gtatgggaatcggggaccaacgacgccacagatggtacagtggcgtggcgcaacactctg
gaagactgggcagctgaagactggaccgaggacgtgagcctctcagagaccaaagtgttc
acctcctcatgtgcagcacctccagctgagaatcatcatatcacccctggccaaagtctg
gacctggcgtctctgctgcagaagcctgccggcagggaggagtcggagaatccgaagcct
gcctcgtctcaagggcttggccacagcctcgtcttcaccaactcccaccaccagcccacg
cgcaacggaggcagcgctgccacgggcagtaccagctacgcacatgccaccctgtcctca
gttctgggttctggatttggggagctgggtggccctaagctgggacagaccgcaggacaa
cagatactggagcaactgaagggaccaggcctagggcagcttacctcccagcctcctagc
tcgggggatgaccgtgaccctgtaggtggactggggggtacagggatgcctgttccctct
tcatcttgggatatcaaacctccgggaacacagagctctgcctcactgccctcccaattc
agtcgggagtttaagatgcaaccagagccttcgtcggtgctaagccagctgagccagcgg
cagcagagctctctgagcaacacgggatctctaccgctggcgaggcagcccagtcctctg
gcacagaacggcccgtcggccatccaggctccaccggaggcattctccaaagcgccggag
ccttctcaaacccacgcggcccctccgcagaccacagactcgcaggtcagcggcacgcag
caccggcagattaagacacagaaacgaaggatagctcccacgtccaagattccgtccact
gcggtggagatgcctggctcggcagacgtgtctgggctcaacgtgcaattcggcgctcta
gactttggctcagagtcagcgttgccagagtttggccagcctgagagttgcaacagtgaa
gctacgcgagaagccactgtgcctgttccgcagacccaaagcagcctctactccaaacca
gtcagcagtgaatctctggccagtactgtcccattgttgctgcctcctctggcctcctct
gacagcatctacccacctccctcggtgctacccagtctcgctccctccacccttactacc
cccagtgccaactcagtatccacctctacctcctcatcttcctcctcttcttcctcgtca
tcggtggcgtcctcagctgggaacagctttgactgtggagtggctcctcactcaagactg
accttctcccagagcaaggagtcctctggacctgtgacgaatggttttaatggtgtcagg
acctctgctgctctagactctacatcgagttcctccactccgaagccagagtctccgtct
ttaggcggtagcaccagtgttgctctgccttctgccccgttgtctcttttgcccccttca
gttacgccccacagctcgactctatccagcctggcacctgaactgccctctgcaaccctc
tcctctctcagcagtagccatgtgagcagtggccattcctcagtatcagcgctcggcacc
agctcttcactaacgtacaccaacgtggacagcgtgaattctctggccgcgtcgtcagcg
gcgttctcctccgtgtccgtctcagcgctttccggtaacaacggcgtgagcagtgcagta
agcagcagcctgcactcggcagtacttgggctcagcgggaacggaaccaccgcaccctcg
gccatcaggaccgcacccctgctttcttcttctactggaaaagccccccctaacttgtct
cagggggttcctccgctgctacccaaccagtatatcatggggcctggaggcctgctgcct
gcatacccgcaaatctacggctacgaagacctccacatgctgcagtccaggctaccaatg
gattactatggaatcacattcccagggcccactgcaaccctgtctggcagagatgggaac
ctagccaataatccttactcaggtgaagtgactaagtttggcaggggcgactccacctca
cccgcgccccctactaccctgtcagcagctcacgctccccaggcagctcagcccccgcag
gcgcagagccaaggtcagagccagcctcagccgcagggccaccacagcacccagcaggcc
ttcctcaacccagctctgccccccggttacagctacacgggcttgccttactacccaggc
gtgcccggcatgcccagcgccttccagtatggccccaccatgttcgtacctcctgcttcc
gctaagcagcacggcatgggcctgagcaacccatccacaccgttccagcagcccggtggt
tacagccagcacacctttagctcagggtatgatgacctgacacaaggcccagcgggagca
gaatatagtaaagggtacagcaacagctctcagacacaggccaaatctgctgcttctggc
ccaggaaaaggtgtctcggtgacatccagtaactcgggagtgcccgacatcagcggaact
gtttacaacaagactcagtcctttgataaacagggtttccacgccggcacaccacctccg
ttcaacctgccctcggctctagggggtacgggacctctgaaccccggaggtgcccctggt
tacgctccaggtccgttcctgcacatcctgcctgctcaccagcagcctcactctcagctg
ctgcaccaccacctcacccaggacggacagggtgggccgaatcagaggaaccagagcagc
agcatgcagcagaagacccaggtcaacaaatccagctacggcagctctccctactggggc
aattaa

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