Ictalurus punctatus (channel catfish): 108278688
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Entry
108278688 CDS
T04658
Name
(RefSeq) conserved oligomeric Golgi complex subunit 1 isoform X1
KO
K20288
conserved oligomeric Golgi complex subunit 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108278688
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
108278688
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Dor1
EXOC6_Sec15_N
Dna2
Motif
Other DBs
NCBI-GeneID:
108278688
NCBI-ProteinID:
XP_017347663
Ensembl:
ENSIPUG00000001122
UniProt:
A0A2D0SYA6
LinkDB
All DBs
Position
2:12611055..12629975
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AA seq
970 aa
AA seq
DB search
MTQFEETRTSGFSSWQRRETAMAAVPVQSLRVSDIKDPTVLFERYGTDEIRAVERKVRGE
IEQKKEELRQMVGERYRDLIEAADTIGEMRECSEKVVQSIQDMQKYCHTLKHSKHTSQSS
RAEGEKQSQEKFYAMAAQIKLLLEMPERMWSALEGAQYLQATQLHLLCAHLHRLLHLDTP
AASYSPVLSRFPILIQQVAAAGHFRSTILLDSKSVLRGRAVSDQAIAEALVSTMLLEDSS
PRQALADFLLARTASIQQLLKQPQHGAGIKAQVCSLVELLVTTLYQAHAVFYLPPEGRAA
EPGLGYGLLFTTLENVTSGKGRKVLHGEVSTGSWFKHLPPSVTDFQPALRTLAQPIQSEQ
LRDTLQHWIDTCKEDMRSGVSSLLIYVKSVKGLASIRDAVCDLLSSDSISQHWSGVCARL
LDKPLDLWHDLLQPLFLHRLQVITQEGMESISGSCKQLLSSTLQELEGEASSHGSRFDSD
VSSFLWCESQSDLPSDAAWVSVSQRGTRPESGLSMKTRALTPRVQNFCATLDSKLKAQLE
DLGHFLPSDTPTSCVNRYADGPAVEQALSERCTTCLADIVSSVRTELAASSGQMSSVLFL
ARLCQSLGELCPSLKQCILGRQGENRSTGSPRVQSRKLGKAGVSKGVDLSPAQVTWARIK
DELLACSMDAYRIWSSAVSQTLVRNFASSLHAATAGSVLITATNWEELEIQEEAESGNTV
MSKIHLPVQPSWYVQSLLFHLCLEVNKVGGHTVPRVTLTELLRACLDQVLTEYDKLTQPT
QSKHAAPPITQNRGLQLLFDVRYLSAALTARLEDTRSSRSYVQPRIQQICDALESHIDPF
DLDVFTPHLNSNLNRLTQRTSVLLGLLTGAEKQFTPRSSNVSSQEPYKILPLASSQIRFG
LLPLSMTNSRKAKSSSRATDITRPLVAPSSNPIPEDSFRPGNLFRQLANQEEEAVGPSLF
KLGWLSGMAK
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagttcgaagaaacgcgcacttccggtttctccagctggcagcgcagggaaaca
gcaatggccgcggttccggttcagtcacttcgggtgtcggatattaaagacccgacggtg
ttgtttgagcgatacggcaccgatgaaatccgcgcggtggagcggaaagtccgcggggag
atagagcagaagaaagaggagctgcggcagatggtaggggagaggtacagagacctgatc
gaggctgcagacaccatcggggagatgagggagtgctcagagaaagtggttcagtccatc
caggatatgcagaaatactgtcacacactgaaacatagcaaacacacttctcagagcagc
agggcagagggtgaaaagcagtcacaggagaagttctacgccatggcggctcagataaaa
ctgctgctggagatgcctgagcggatgtggagtgcgctggagggagctcagtacctgcag
gccacgcagctacacctcctctgtgctcacctgcaccggctgctccacctggacacgccc
gctgcctcatacagccctgttctgagccgctttcccatcctcatacagcaggtggctgcc
gctggacacttcaggtcaacgatcctgttggacagtaagtcggtgttgcggggcagagcc
gtatcggatcaggcgatcgctgaagcgctggtgtccaccatgctgctggaagacagctca
cctcgacaggccctcgctgacttcctgctggccagaacagcatccatacagcagcttctc
aagcagcctcagcacggagctgggattaaagctcaggtctgctctctggtggagttatta
gtcacgacgctttatcaggcccacgccgtgttctacctgcctccagagggccgtgcagca
gaaccgggcctcggctacgggttactcttcaccacgctggagaacgtgacgtccggtaaa
ggcaggaaggtgttgcacggcgaggtgagtacaggcagctggtttaagcatctgccgcca
tcagtgacggacttccagcctgcgctgcgcacgctggctcagcccatccagagcgaacag
ctccgggatacactgcagcactggatcgacacgtgtaaagaggacatgcgcagcggtgtg
agcagcctgctcatatatgtgaagagtgtgaagggtttggcctccatcagggacgcggtg
tgtgacctgctgagcagcgactccatcagccagcactggagtggtgtgtgtgcgcgcctg
ctggataaaccgcttgacctgtggcatgacctgttgcagccacttttcctccacagactg
caggtgatcactcaggagggcatggagtcgatctccggcagctgtaaacagctgttgtcc
tccacgctgcaggaactggaaggcgaggcgtcgagccatggttcgcggtttgacagcgac
gtgtcgtcatttctttggtgcgagtctcaatctgaccttccgagcgacgccgcgtgggtg
agcgtgtctcagcgcggcacgcggcccgaaagtggcctgtccatgaagactcgcgccctc
acaccgcgcgtccagaacttctgcgccaccctcgattccaaactcaaggcccagcttgag
gacctggggcacttcctgccctcggacactcccacttcgtgtgtgaatcgctatgcggac
ggcccagcggtggagcaggcgttgagcgagcgctgcacaacctgtctcgcggacatcgtg
agcagcgtccgcaccgaactagcggcttcctcgggtcaaatgagctctgtccttttcctg
gccagactgtgtcaatctctgggggagctctgccccagcttaaaacagtgcattctgggc
cggcagggggagaatagaagcacgggaagcccccgggtccaaagccggaagttgggaaaa
gcaggtgtgagtaaaggtgtggacctcagcccagctcaggtcacatgggcccgaataaag
gacgagctgcttgcctgcagcatggacgcctatcgcatctggagctctgctgtgtcccag
actttggtgaggaacttcgctagttctctgcacgctgcaacagccggttctgtcctaatc
actgccacaaactgggaggagctggagatccaggaagaggcggagtcaggcaacacggtc
atgtctaaaatccatcttccagtccagccctcatggtacgttcagtctctgctctttcac
ctgtgcctggaggtgaataaggttggcggtcacactgtgccgagggtcacgctgaccgag
ctgctgcgagcctgtctggatcaggtgctcacagaatacgataagctcactcagcctacg
caaagcaagcacgcagctcctcccatcactcagaatcgaggcctgcagctactgtttgac
gtgcgctacctcagtgccgctttaacagcccggctagaggacaccaggagctcgcgctcg
tacgtccagcccaggatccagcagatctgtgacgctcttgagagccacattgatccgttt
gacctggacgtcttcactcctcatctgaacagcaacctgaaccggctgactcagaggact
tcggtgctcttaggacttttaactggcgcagagaagcagttcactcccagaagcagtaac
gtgagctcacaggagccgtacaaaatccttccattggccagcagtcagatccggttcggc
ttgctgccgctgagtatgaccaattcccggaaagccaaatcatcttctagagcgacagac
atcaccagaccgctcgttgcaccttcatccaatccgattccagaagacagcttccgccca
ggaaacctcttccggcagttagccaatcaggaagaggaagctgttggcccctccctcttc
aagttaggctggctttctggcatggccaaataa
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