Ictalurus punctatus (channel catfish): 108278705
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Entry
108278705 CDS
T04658
Symbol
si:ch211-241b2.5
Name
(RefSeq) programmed cell death 1 ligand 1
KO
K06745
programmed cell death 1 ligand 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108278705 (si:ch211-241b2.5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ipu04090
]
108278705 (si:ch211-241b2.5)
CD molecules [BR:
ipu04090
]
Proteins
108278705 (si:ch211-241b2.5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
V-set
NACHT
ig
C2-set_3
I-set
nSTAND3
AAA_25
CcmD_alt
RIFIN
AAA
AAA_22
AAA_30
C2-set_2
Motif
Other DBs
NCBI-GeneID:
108278705
NCBI-ProteinID:
XP_017347687
Ensembl:
ENSIPUG00000014774
UniProt:
A0A2D0SYD8
LinkDB
All DBs
Position
18:6926331..6942310
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AA seq
496 aa
AA seq
DB search
MRGEIFTLLVTWPCLQALFTVESEQDSYDGELHDKITMGCRFSHVPSVSRISIIWQRVSP
LETVGVYQLDKGNENPNFTSVQYQSRVRLLKEELEKFRAVIELSQLRLNDSGTYQCIVIQ
DEVDYKQTKLTIRAPYKAIKKTVRRLSEKEVELSCESQGLPLAHVAWSDGTLRDLTNRSE
SSHETNSDGVFVVTSQLSVAYDVNNYTCSYMTDDSKTSQTATFSIPDEIPENSKLTTGYA
AIAVIVVMCVGLVLALLILRRKKKGQKRMDISSEECESPLQNLTVTSTDHLLSKSNSRFD
SLTFTSEYNVQDMLKQKYAEFNKTTEMKTDFTLPHRLLSGENQHVDIHSILPGPRETVLL
EGKEGAGKTFIAQTLAWSWAEQSSLDLFNIQKLQLVILVDVKGDGGEFFQMVNSKIPAEA
GLQMNKLKDILLGDGDNLIILDGYKEGDRELDKSLIKFLRERCTCRVLITACPGEHGILG
ETDRKVVRLHTLPVQA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtgaaatattcacactgctcgtcacgtggccatgcctacaagctctcttcact
gtggagtcggagcaagattcctacgatggagagctgcatgataaaatcacgatgggatgc
cgtttttcacacgtcccgagcgtctcgcgcatatccatcatttggcagcgcgtcagtccc
ctagagacagtgggagtatatcagctggataagggcaatgagaaccccaacttcaccagt
gtacagtatcagtcacgagtgcggctcctgaaggaggagctagagaaatttcgggcggtg
atcgagctctcccagcttcgtctgaacgactcgggaacctatcagtgtatcgtgatccag
gatgaggttgactacaagcagaccaaactcaccatccgagcaccatataaagcaattaag
aagaccgtcaggaggctaagtgaaaaggaagtggagctttcctgtgagtcccaaggcctc
ccgttggcccatgtggcttggagtgatggcacgctcagggatctgacaaaccgctcggag
agcagccatgaaacaaacagcgatggtgtttttgttgtcaccagccaattgtccgtcgca
tatgatgtcaacaattacacctgttcctatatgaccgatgacagcaaaacgagccagacg
gctacgttcagtatcccagatgaaattccagagaacagtaaattgaccacaggatacgca
gctattgccgtgatagtcgtgatgtgtgtgggtttagtcttggccttgctgattctccgc
aggaaaaagaaagggcaaaaaagaatggacatctcatctgaggaatgtgaatcacctcta
caaaatctgactgttacgtcaactgaccatttactttcaaagtctaactccagattcgat
tctctgacttttacatcagagtataatgtgcaagacatgctaaagcaaaaatatgcagag
tttaacaaaactacagagatgaagactgatttcacactcccacatagacttctctctgga
gaaaaccagcatgtcgacatccactccatcctcccaggcccgagggaaactgtgcttctg
gaggggaaagaaggagccggtaaaaccttcatagcccaaaccctggcttggtcttgggct
gaacagtccagtttagaccttttcaacatccaaaagctccagcttgtgattttagtagac
gtcaagggagatggaggggagttcttccaaatggttaactccaagatcccagcagaagcg
ggactgcagatgaacaaactaaaagacattcttctaggggacggggacaatctcatcata
ctggacggttataaagaaggggacagagaactggataagtcacttattaagtttctaaga
gagagatgcacatgcagggtgctgatcacagcgtgccctggagagcatggcatcctggga
gaaacggacaggaaggtagtgaggcttcatacgctccctgtgcaagcgtga
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