KEGG   Ictalurus punctatus (channel catfish): 108278705
Entry
108278705         CDS       T04658                                 
Symbol
si:ch211-241b2.5
Name
(RefSeq) programmed cell death 1 ligand 1
  KO
K06745  programmed cell death 1 ligand 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108278705 (si:ch211-241b2.5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:ipu04090]
    108278705 (si:ch211-241b2.5)
CD molecules [BR:ipu04090]
 Proteins
  108278705 (si:ch211-241b2.5)
SSDB
Motif
Pfam: Ig_2 Ig_3 V-set NACHT ig C2-set_3 I-set nSTAND3 AAA_25 CcmD_alt RIFIN AAA AAA_22 AAA_30 C2-set_2
Other DBs
NCBI-GeneID: 108278705
NCBI-ProteinID: XP_017347687
Ensembl: ENSIPUG00000014774
UniProt: A0A2D0SYD8
LinkDB
Position
18:6926331..6942310
AA seq 496 aa
MRGEIFTLLVTWPCLQALFTVESEQDSYDGELHDKITMGCRFSHVPSVSRISIIWQRVSP
LETVGVYQLDKGNENPNFTSVQYQSRVRLLKEELEKFRAVIELSQLRLNDSGTYQCIVIQ
DEVDYKQTKLTIRAPYKAIKKTVRRLSEKEVELSCESQGLPLAHVAWSDGTLRDLTNRSE
SSHETNSDGVFVVTSQLSVAYDVNNYTCSYMTDDSKTSQTATFSIPDEIPENSKLTTGYA
AIAVIVVMCVGLVLALLILRRKKKGQKRMDISSEECESPLQNLTVTSTDHLLSKSNSRFD
SLTFTSEYNVQDMLKQKYAEFNKTTEMKTDFTLPHRLLSGENQHVDIHSILPGPRETVLL
EGKEGAGKTFIAQTLAWSWAEQSSLDLFNIQKLQLVILVDVKGDGGEFFQMVNSKIPAEA
GLQMNKLKDILLGDGDNLIILDGYKEGDRELDKSLIKFLRERCTCRVLITACPGEHGILG
ETDRKVVRLHTLPVQA
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgaggggtgaaatattcacactgctcgtcacgtggccatgcctacaagctctcttcact
gtggagtcggagcaagattcctacgatggagagctgcatgataaaatcacgatgggatgc
cgtttttcacacgtcccgagcgtctcgcgcatatccatcatttggcagcgcgtcagtccc
ctagagacagtgggagtatatcagctggataagggcaatgagaaccccaacttcaccagt
gtacagtatcagtcacgagtgcggctcctgaaggaggagctagagaaatttcgggcggtg
atcgagctctcccagcttcgtctgaacgactcgggaacctatcagtgtatcgtgatccag
gatgaggttgactacaagcagaccaaactcaccatccgagcaccatataaagcaattaag
aagaccgtcaggaggctaagtgaaaaggaagtggagctttcctgtgagtcccaaggcctc
ccgttggcccatgtggcttggagtgatggcacgctcagggatctgacaaaccgctcggag
agcagccatgaaacaaacagcgatggtgtttttgttgtcaccagccaattgtccgtcgca
tatgatgtcaacaattacacctgttcctatatgaccgatgacagcaaaacgagccagacg
gctacgttcagtatcccagatgaaattccagagaacagtaaattgaccacaggatacgca
gctattgccgtgatagtcgtgatgtgtgtgggtttagtcttggccttgctgattctccgc
aggaaaaagaaagggcaaaaaagaatggacatctcatctgaggaatgtgaatcacctcta
caaaatctgactgttacgtcaactgaccatttactttcaaagtctaactccagattcgat
tctctgacttttacatcagagtataatgtgcaagacatgctaaagcaaaaatatgcagag
tttaacaaaactacagagatgaagactgatttcacactcccacatagacttctctctgga
gaaaaccagcatgtcgacatccactccatcctcccaggcccgagggaaactgtgcttctg
gaggggaaagaaggagccggtaaaaccttcatagcccaaaccctggcttggtcttgggct
gaacagtccagtttagaccttttcaacatccaaaagctccagcttgtgattttagtagac
gtcaagggagatggaggggagttcttccaaatggttaactccaagatcccagcagaagcg
ggactgcagatgaacaaactaaaagacattcttctaggggacggggacaatctcatcata
ctggacggttataaagaaggggacagagaactggataagtcacttattaagtttctaaga
gagagatgcacatgcagggtgctgatcacagcgtgccctggagagcatggcatcctggga
gaaacggacaggaaggtagtgaggcttcatacgctccctgtgcaagcgtga

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