Ictalurus punctatus (channel catfish): 108278770
Help
Entry
108278770 CDS
T04658
Name
(RefSeq) steroid hormone receptor ERR1
KO
K08552
estrogen-related receptor alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108278770
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108278770
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108278770
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
108278770
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108278770
Nuclear receptors [BR:
ipu03310
]
3. Estrogen like
3B. Estrogen-related receptor
108278770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108278770
NCBI-ProteinID:
XP_017347822
Ensembl:
ENSIPUG00000020822
UniProt:
A0A2D0SYS7
LinkDB
All DBs
Position
18:12680696..12706758
Genome browser
AA seq
434 aa
AA seq
DB search
MSSRERRSELHIKAEPSSPEGGGGGGRTSPGGVSSDSSHSGGGGIRGEGAVRYSSPVYSP
ALRCHFKEDGADGADEGSTGSSGGRCKYALSTLPKRLCLVCGDVASGYHYGVASCEACKA
FFKRTIQGNIEYSCPASNVCEITKRRRKACQACRFTKCLKVGMLKEGVRLDRVRGGRQKY
KRRPEVENAMYQSTPIPVKKEGERGSPSIIVSHLLVAEPEKLFAMPDPLQPDTAQRTLTT
LCDLADRELVVIIGWAKHVPGFLSLSLADQMSVLQSVWLEVLVLGVAYRSLGCEDEVVFA
EDFVLDEEMSRLAGLTELNAAICQLARRFRALQLEREEFVMLKAIALTNSDSVYIEDIEA
VQKLRDLLHQALLELVVQQRPEDPQRAGRLLLTLPLLRQTANRALTTFYSIKTRGGVPMH
KLFLEMLEAMMDSP
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccagagagcgccgctcagagctgcacataaaagctgagcccagcagtccggag
ggcggcggcggtggcgggaggacaagccctggtggcgtctcttctgattcctctcacagc
ggaggaggaggcatacggggggaaggagcagtacgctactcctcacctgtatacagccca
gcactgcgctgccactttaaggaagatggagccgacggtgcggacgagggctccacaggc
agcagcgggggccgctgcaaatacgccctgagcacccttcctaagaggctttgcctcgta
tgtggcgacgtggcctccggctaccactacggtgtggcctcctgcgaagcctgcaaagca
ttcttcaagcgaactatccaaggcaacattgagtacagctgtccagcgtccaacgtgtgt
gagatcaccaagagacgcaggaaggcctgccaggcatgtcgctttacaaagtgtctcaaa
gtgggcatgctcaaagagggagttcgtctggaccgggtgagaggagggaggcaaaagtac
aagaggcggccagaagtggagaatgccatgtaccagagcacaccgatacccgtcaagaaa
gagggggaaagaggctcccccagtatcattgtgtcacatctgctggtagctgagcctgag
aagctctttgccatgccggatccactgcagcccgacacggctcagcgcaccctcaccacg
ctgtgtgacctagctgaccgcgagctcgtcgtcatcatcggctgggccaaacacgtcccc
ggatttctctctctttctctggctgaccagatgtctgtgctgcagtctgtatggttggag
gtgctggtactaggggtggcgtatcgctctctgggctgcgaggacgaggtggtgtttgct
gaagactttgtgctagacgaggagatgtcgcgtctggctggcttgaccgaactgaatgct
gccatctgccagttggcacgccgctttagggccctgcagctggagcgcgaggagtttgtc
atgctgaaggccatcgctctcaccaactcagactcagtctacatagaggacattgaggct
gtgcagaagctgagggatcttctgcatcaggctctgttagagctggtggtgcagcagcgt
ccggaagacccgcagcgtgccggccgccttctcctcacgctgcccctcctccggcaaaca
gccaaccgcgcactcaccactttctacagtatcaagacccgcggaggtgtgcccatgcat
aaactcttcctggaaatgctggaagccatgatggactccccctag
DBGET
integrated database retrieval system
