Ictalurus punctatus (channel catfish): 108278776
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Entry
108278776 CDS
T04658
Name
(RefSeq) guanine nucleotide exchange factor VAV2 isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04517
IgSF CAM signaling
ipu04519
Cadherin signaling
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108278776
04519 Cadherin signaling
108278776
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108278776
09142 Cell motility
04810 Regulation of actin cytoskeleton
108278776
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Paralog
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
SH3_1
CH
SH2
SH3_9
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
DUF7145
SH2_2
C1_2
DH_Alsin
CDC24
PH_10
Motif
Other DBs
NCBI-GeneID:
108278776
NCBI-ProteinID:
XP_053543712
Ensembl:
ENSIPUG00000012072
UniProt:
A0A9F7RND2
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Position
18:complement(5208013..5392939)
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AA seq
875 aa
AA seq
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MEEWRQCARWLIDCKVLPPNHRVVWPSAVVFDLAQALRDGVLLCQMLHNLSPGSVDLKQI
NFRPQMSQFLCLKNIRTFLKVCHDKFGLRNSELFDPFDLFDVRDFGKVISALSRISHHSI
AQIKGIRPFPSEDTALNEDDVYRSLEELADEHDVGEDDIYDCVPCEDEGDDIYEDIIKVE
VRQPMKMGMTEDDKRNCCLVEIQETEAKYYKTLEDIEKSYMIPLKQVLTPQEMKAIFVNL
EDIIRVHFALLRAIDQNMVIGGSGLGKIFLDFKERLLIYGQYCSHMEHAQKTLDDLIATR
EEVKCKVEECTMKVQEGKFKLQDLLVVPMQRVLKYHLLLKELVSHSMDRPERQQLKEALE
AMQDLAMYINEVKRDNETLKKIGEFQCSIENLQVKLEEYGRPKIDGEIKVCSIVNRTKQD
RYIFLFDKVVIVCKRKNYNYELKEIIELQYYKMSDDPTNNRDMKKASGKMWSYGFYLIHL
KGKQGFQFFCKTEDTKRKWMEQFEMAMSNIKPERATANQHDFQMHTFEKNTNCRACKMLL
RGIFYQGYYCSRCGTGAHKECLEVITICKINPHDSELGLPQSGPKMVAIRNYHGTPAPPG
KCPLSFQTGDVIELLKGDPDTSWWEGKLIQTLKIGYFPSSSVKPCLDPKPSQSLPSRQSS
REMDYNVYPWFAGNMERQQADNLLKSHSSGTYLIRERTAEAERFAISIKFNDEVKHIKVI
EKDNWIHITEAKKFESLLELVEYYQCHSLKESFKLLDTTLRYPYKSRERSNSRASTRSPA
ASCASYNFSFLSPQGLNFSSQSSTPFWSVFTPKVVSTAVARYNFAARDMRELSLREGDTV
KIYSKIGGDQGWWKGEANGRIGWFPSTYVDEEGVQ
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtggagacagtgcgcccggtggctcatcgactgcaaggtcttgcccccgaat
caccgggtggtttggccctcggctgtcgtcttcgacctggcccaggcgctccgagatggg
gtgctcttgtgccaaatgctgcacaatctgtcacccggatctgtagacctgaagcagatc
aacttcaggcctcagatgtcacagttcctgtgcctgaagaacatccggacgtttctcaag
gtgtgccacgacaagttcggtctgaggaacagcgagctcttcgaccccttcgacctgttt
gacgtgagggacttcgggaaggtgatctctgcgctgtccagaatctcccaccacagcatc
gctcagatcaaaggcatcaggccttttccatcagaggacacagcgctgaacgaagatgac
gtctaccgaagcttggaggaactggccgatgagcacgatgtgggtgaggacgatatctac
gactgtgtgccatgtgaagatgaaggagatgatatctacgaggacatcattaaggtggaa
gttagacagcccatgaaaatgggcatgacggaggacgacaagaggaactgctgcttggtg
gagatccaggagacggaagcgaagtactacaagacactggaggacattgaaaagagttac
atgatccccctgaagcaagtcctaactccacaggagatgaaggccatatttgtgaatcta
gaggatatcatcagagtccactttgccttgctgagggctatcgaccagaacatggtgatc
ggaggcagcggacttggaaagatcttcctggacttcaaggagaggctgctgatctacggt
cagtactgcagtcacatggagcacgcccagaagacgctggacgacctgattgccacgcgg
gaggaggtgaagtgtaaagtggaggagtgcaccatgaaggtacaggaggggaagttcaaa
ctgcaggatctgctggtagttcctatgcagagggtcctcaaataccacctcctgctcaag
gagctggtgagccactcgatggatcggccggagagacagcagctgaaggaggccctggaa
gccatgcaggacctggccatgtatatcaatgaggtgaaaagggacaacgagactctgaag
aaaatcggggaatttcagtgctcaatagaaaatttgcaggtgaaactggaggaatacggg
aggccaaagatagacggagaaatcaaagtgtgctctatagttaaccggaccaaacaggac
aggtacatcttcctgtttgataaagtggtaattgtgtgcaagagaaaaaactacaactac
gagctgaaagaaatcatcgagctccagtattacaaaatgtcagacgaccctacaaataac
cgagacatgaaaaaggccagtggaaagatgtggtcgtacggcttctacctgatccatctg
aaaggcaagcaaggcttccagttcttctgcaagacagaagacaccaaaagaaagtggatg
gaacagtttgagatggccatgtccaacatcaagccagagagagccacggccaaccagcac
gacttccagatgcacacgtttgaaaagaacaccaactgcagagcctgtaagatgctcctg
agggggatcttctatcagggttactactgttcccgctgtgggaccggtgctcataaagag
tgcctggaggtcatcaccatctgtaaaatcaatccccatgattcggagcttggacttcct
cagtcaggtccaaagatggttgcaatcaggaactaccacggtactccagctcccccgggg
aagtgccctctctccttccaaacaggtgatgtcattgagcttttgaagggagatccagac
acctcttggtgggaggggaagctcattcagaccctgaagatcggctacttccccagctcc
agcgtaaagccatgtctagatccaaagccgtctcagtctcttcccagtcgtcagtcctca
agagagatggattacaatgtttatccttggtttgcggggaacatggagaggcagcaggct
gataacctcctgaagtctcacagcagcggaacatacctgatcagagagcgaaccgcggag
gccgaacgctttgccatcagcataaagttcaatgatgaagtgaagcacattaaagtgatc
gagaaagacaactggattcacatcacagaagcaaagaagtttgagagcctgctggagctg
gtggagtattatcagtgtcactcactgaaagagagctttaagctgctggacacaacgtta
cgatacccgtacaagtccagagagcgctccaactccagagccagcacccgctctccagca
gcctcctgtgcttcctacaacttctccttcctcagtcctcaaggcctcaacttctcatct
cagagctctactcccttctggtcagttttcacaccgaaggtggtgagcacagcggtggcc
agatataactttgccgctcgagacatgagagagctgtctttgagagaaggcgacaccgtg
aaaatctacagcaagatcggaggagaccagggctggtggaagggagaggctaacggcagg
attggctggttcccttcaacatacgtcgatgaggaaggcgtgcagtga
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