Ictalurus punctatus (channel catfish): 108278824
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Entry
108278824 CDS
T04658
Symbol
rnf165a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108278824 (rnf165a)
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108278824 (rnf165a)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108278824 (rnf165a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
U-box_ZFPL1
zf-ANAPC11
Prok-RING_4
zf-RING_4
zf-RING_Vps41
zf-Nse
zf-RING_16
zf-RING-like
RINGv
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
108278824
NCBI-ProteinID:
XP_017347936
Ensembl:
ENSIPUG00000005596
UniProt:
A0A2D0SZI0
LinkDB
All DBs
Position
18:1382809..1397815
Genome browser
AA seq
308 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRSRGTHFSRHQHSHATSCRHFHLATPLPTEFPPTGLAAPQYQE
VPPTFLPQALQQQYLIQQQLLQRRRTQERVPLNTHRLRPGYDYSPPMHIPQPITQQPRYL
AEGTDWDLSVDAGLSHQYSLQQIPQPYQHYLASPRMHHFPRNTSSTQVVVHEVRNYPYPQ
LHLLALQSLSPSRHASAVRESYEELLQLEDRLGSVSRGAIQTTIERFTFPHKYKKRKPLD
MKLCDDEEESDLDEKCTICLSMLEDGEDVRRLPCMHLFHQVCVDQWLATSRKCPICRVDI
QTQLTPES
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagttcatgtcggatatctggttcttcccgtgtttggttcagtaagaagcaga
ggtactcatttcagcaggcaccagcacagccatgctacatcctgccgacatttccacctg
gccacaccccttcctactgagttcccgccaaccggccttgcggccccacagtaccaggaa
gtcccacccactttcctacctcaggccttacagcagcaatacctcatacagcagcagcta
ctgcagcgcagacgtacacaagagcgtgttcctctcaacacacaccggttacgcccagga
tatgattattcccctcccatgcacattcctcagccaatcacacaacagcccagataccta
gccgagggcacagactgggacctgagcgtggacgcgggtttgtcacatcagtactcgctg
cagcagatcccacagccctaccagcactacttagcctctcccagaatgcaccacttcccc
cggaatacttcgtctacgcaagtggttgtccacgaggtaaggaattatccgtatccccag
ctgcacctactggctctgcagagtttaagccccagccgacatgcttctgctgtacgggag
agttatgaggaattgctccagctggaggatcgtttgggcagcgtgagccgaggagccatc
cagaccaccattgagaggtttaccttccctcacaagtataagaagcggaagccgttggac
atgaagctgtgtgatgatgaggaggagtccgacttggatgagaaatgcaccatctgtctg
tccatgctggaggatggcgaggacgtcaggcgattaccctgcatgcacctctttcatcag
gtgtgtgtggatcagtggttggccaccagcaggaagtgtcccatatgcagagtggacatc
cagacacagctaacacctgagagctga
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