Ictalurus punctatus (channel catfish): 108278856
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Entry
108278856 CDS
T04658
Symbol
acsl6
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00061
Fatty acid biosynthesis
ipu00071
Fatty acid degradation
ipu01100
Metabolic pathways
ipu01212
Fatty acid metabolism
ipu03320
PPAR signaling pathway
ipu04146
Peroxisome
ipu04216
Ferroptosis
ipu04920
Adipocytokine signaling pathway
Module
ipu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108278856 (acsl6)
00071 Fatty acid degradation
108278856 (acsl6)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108278856 (acsl6)
09143 Cell growth and death
04216 Ferroptosis
108278856 (acsl6)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108278856 (acsl6)
03320 PPAR signaling pathway
108278856 (acsl6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ipu01004
]
108278856 (acsl6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108278856 (acsl6)
Enzymes [BR:
ipu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108278856 (acsl6)
Lipid biosynthesis proteins [BR:
ipu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108278856 (acsl6)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of breast milk
108278856 (acsl6)
Exosomal proteins of breast cancer cells
108278856 (acsl6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108278856
NCBI-ProteinID:
XP_017347995
Ensembl:
ENSIPUG00000020795
UniProt:
A0A2D0T072
LinkDB
All DBs
Position
18:complement(181792..215332)
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AA seq
720 aa
AA seq
DB search
MFAFALMAGSLWIILELSTTLIERMQVQELVISLWLAKLEKLFHLICSTPTAALFGLGAL
TAMLAYWLATRPRALMPPCDLRHQSEEVEGGGHKSMLVDNPNLFTRYYEDTKTLYEAFQR
GLQITGNGPCLGSRLPNQPYKWLSYREVTTRAEHLGSGLLSQGCQTNSKQFIGVFAQNRP
EWIISELACYTYSMVVVPLYDTLGTDAVQYIINTAEISTVICDKPEKAKLLLDNVERRKT
LTLKRVILMDPFDVELVEQGKKCGVHIQALNDVEALGQEHYRKPMPPRSEDLSIICFTSG
TTGNPKGVMLTHGNIVADVSGFLKATDKVISPNQEDVLISFLPLAHMFERLIEAVVYCHG
GRIGFFQGDIRLLSDDMKALRPTVFPVVPRLLNRMYDKIFTQANTPVKRWLLNFAAKKKG
EEVSSGIIRNDSIWDKIFFRKIQANLGGRLRMVITGAAPTSPAVLSFLRAALGCQVYEAY
GQTECTAGCTFTTPGDWTSGHVGAPLPCNLIKLVDVPEKNYFTSKGKGEVCVKGPNVFKG
YLKDPVMTAETLDSDGWLHTGDIGEWLPNGTLKIIDRKKHIFKLAQGEYISPEKIENIYI
RSEPVSQLFVHGDSLQACLVGIVVPDPEVMPSWAQKRGIDGCYDDLCKNMELKKAILDDL
VCLGKAGGLHSFEQVKDIYIHNEMFSIENGLLTPTLKAKRPELKEHFKQQIEHLYDNITM
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccttcgctctaatggcaggctccctctggatcatactagagctgagcactacg
ctgattgagaggatgcaggtgcaggagctggtgattagcctgtggctagctaaattggaa
aagctgtttcatctgatctgttcaacgcccactgctgcactgtttgggcttggtgctctg
actgccatgttggcctactggctggcaacacgcccgcgtgccctcatgcccccatgtgac
cttcgccaccagtctgaagaagttgagggaggtggccataaatcaatgttggttgacaat
cccaacctgttcacacgctactatgaagataccaaaaccttatatgaggcgttccagagg
ggactgcaaataactggtaatggaccgtgcttaggttctcgtctccccaatcaaccatac
aaatggctttcttatcgagaggttacgactcgggcagagcacctgggctcaggcttactg
tctcagggatgccagaccaattccaagcagtttattggagtatttgcccagaataggcca
gagtggataatctcagagctggcttgttacacatactccatggtggtggtaccactttat
gacacactgggtactgatgcagttcaatacataatcaacactgcagaaatatctacagtg
atctgtgataaaccagaaaaggccaagctgcttctagataatgtagagagacggaagacg
ctgaccctgaagagggttatcctcatggacccattcgatgtagaacttgtggagcagggc
aaaaagtgtggtgttcacatccaggccctgaacgatgttgaggccttaggtcaagagcat
tacagaaaaccaatgccacctcgttcagaagacctttcaataatctgcttcaccagtggc
acaacaggaaatccaaagggtgtgatgcttacacatgggaacattgttgctgatgtctct
ggctttctgaaagcaacagataaagtcatatctccaaatcaagaagacgttctcatttct
ttcttgccccttgcacacatgtttgaacggctcattgaggcagtggtgtattgtcatggg
ggcaggatcggcttttttcagggcgatatccgtctcctttctgacgacatgaaggccctg
cgccccactgtcttccctgtggtgcctcggctcctcaaccgcatgtatgataagatcttt
actcaggccaatactcctgtgaagcgttggctccttaattttgctgcaaagaaaaaagga
gaagaggtcagcagtgggatcatccgcaatgacagcatttgggacaagatcttcttcagg
aagattcaggccaatttaggtgggaggcttcgtatggttataacaggtgctgctcccacc
tctcctgctgtcctcagcttcttgagagcagctctgggttgtcaggtctatgaagcatat
ggacagacagagtgcacagctggctgcacattcaccacccctggagactggacttcaggt
catgtgggtgcaccactaccatgcaacctcattaaactcgtggatgtgccagagaagaac
tactttacctcaaaaggaaagggggaggtgtgtgtcaaaggcccaaatgtctttaagggc
tatctgaaggatccagttatgacagcagagacactggattcggatgggtggcttcacaca
ggagatattggagagtggttaccgaatggcacattaaagatcatagacaggaagaagcac
atatttaagcttgcacagggtgaatacatttcccctgagaagatcgagaacatctatatt
cgcagtgagcctgtgtctcagctctttgttcatggagacagtctgcaggcttgtctagtt
ggaattgttgttccagatcctgaagtgatgccctcttgggcccagaaaaggggcattgat
ggatgctatgatgatctgtgtaagaatatggaattaaagaaagccatcttggatgacctg
gtgtgtttgggcaaagctggtggcctccattcatttgaacaagtaaaagacatctacatt
cataatgagatgttctccatagaaaatggattgctgacccctacattaaaagccaagagg
ccagagcttaaagaacatttcaagcagcagatagaacatctgtatgacaacatcacaatg
taa
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