Ictalurus punctatus (channel catfish): 108278875
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Entry
108278875 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04120
Ubiquitin mediated proteolysis
ipu04144
Endocytosis
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108278875
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108278875
09144 Cellular community - eukaryotes
04530 Tight junction
108278875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108278875
04121 Ubiquitin system [BR:
ipu04121
]
108278875
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108278875
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
108278875
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
HECT type E3
108278875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
MUG113
Motif
Other DBs
NCBI-GeneID:
108278875
NCBI-ProteinID:
XP_017348040
Ensembl:
ENSIPUG00000017643
UniProt:
A0A2D0T0B9
LinkDB
All DBs
Position
18:8211194..8275373
Genome browser
AA seq
1246 aa
AA seq
DB search
MSRRLRLYFGSNRSNTAPELQEVEDEDQNTHHTEYDVAGSGDMLFQMRLQNPSLEEDAPV
SGAFLKRSSSMFIPQLQSQTEAPRPTKSTSMQISLQRSSTPQEDVQSMDSPPGYPQDPAP
AYTEPAEDWLSSQSAFYRRRESQTTLITDQTNPGTDPAQPKRRVFCVRPQDLQNGLSPSG
IVNEGSPGISIGGFCIQRSATNGSDVQQFRIVPYSQDGQNGACRWSVQPTTDGNSGTRRL
VFQLQQDRGRTVATNGQREASELGCKGGRAVRYPRIRLERSTSQPLQPRQVPSRPGSMPN
LHAPISENEVDEDGAQGCTFKIRKEQDPRQAKFKICFSQGGSHRSNSTQDISFGKGPTWN
DPKTRDDFLGQVDVPLNYLPTEDPAMERPYTFKDFLLRPRSHKSRVKGYLRLKMAYLPKN
GAQEEESGEMREEAEGWEVDSVDHGGSRHSQQVLPPLPAGWEEKVDNLGRTYYVNHNNRT
TQWKRPSTVDMVSETESDNHLRQINQEAHRVFRSRRHISEDLENEHLDPRDLDDPLPSQS
WDPITEEDFSGMSEAVAGPAPAPSATPIHQFSTPEFSEEITMRLSLTPNTNGEMSGANNT
GSLLSSRLRSSSMTDGVSDQAQTPSPMTSQSRRTRAQTVTGLEQPMSLPSGWEERKDTKG
RTYYVNHNNRSTTWTRPILQHTEDGVSSPAGAVGGAVATTPSSSGHLSEPQIRRPRSLSS
PTVTLSTPPEGANSVPHPRAVKDTLSNPQSPQPSPYSSPKSQHKVTQSFLPPGWEMRIAP
NGRPFFIDHNSRTTTWEDPRLKYPVHMRVKGALDPGDLGPLPPGWEERVHADGRTFYIDH
NTKNTQWEDPRLQSPAITGPAVPYSREFKQKYDYFRKKLKKPADIPNRFEMKLHRGSIFE
ESYRRIMSLKRPDVLKSRLWIEFESEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATD
NYTLQINSNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLGKPITLNDM
ESVDSEYYNSLKWILENDPTELDLRFCIDEDNFGQTYQVDLKPSGSDLVVTNDNKKEYID
LVIQWRFVNRVQKQMNAFMEGFTELILIDLIKIFDENELELLMCGLGDVDVNDWRQHTVY
KNGYCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQ
WGTPDKLPRAHTCFNRLDLPAYETFDDLREKLLMAVENAQGFEGVD
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccggctgcgtctctactttgggtccaaccgcagcaacacagctccagagtta
caggaagtcgaggatgaagaccagaatacacatcacacagaatacgatgtcgctggatcg
ggagacatgcttttccaaatgcgtctgcagaacccgtcgcttgaggaggacgctcctgtt
tctggtgctttcttaaaacgaagctcctccatgtttatcccgcagctccagagccaaacc
gaagcgccaaggcccaccaagagcacgtccatgcagatctccctccagcgctcgtctaca
ccccaggaagatgtacagtccatggattcaccaccaggatacccccaggatccagctccg
gcatacactgagcctgcagaggactggttatcttctcaatctgcgttttatcgcagaaga
gaaagtcaaaccactctgatcacggatcagactaacccaggaacggatcctgcccagccc
aagaggcgagttttctgcgtcaggccacaggatttacagaacgggctctctccttcggga
atcgtcaacgaaggttctccaggaatcagcatcggtgggttttgtatccagcgaagtgcc
accaatggatctgatgtccagcagttcagaatagttccgtacagccaggatgggcaaaac
ggtgcctgccgttggtctgttcagccaaccacagatggaaattctggtactcggagactc
gtcttccagctccaacaggacagaggaagaaccgtggctacaaatggccagagagaggcg
tctgagcttggctgtaaaggtggccgtgcggtacgttaccctcgaatccgactcgagagg
agcacctctcagcccttacaacctagacaagtaccatcgcgccctggatctatgcctaac
cttcatgcccccatctctgagaacgaagtcgatgaggacggagctcaaggctgcaccttt
aagatcaggaaagagcaggatccgaggcaggccaagttcaagatatgtttcagccaagga
ggcagccacaggtctaactcgacacaggatattagctttggaaaaggacctacctggaac
gacccgaagactagagatgacttcctgggacaggtggatgtgcctctgaattacttgccg
acagaggatccggcgatggagcggccatacacatttaaagacttcctcctcaggccaaga
agtcataagtcaagggtgaaaggttatctgaggctgaagatggcgtacctgccgaagaac
ggtgctcaggaggaagagagtggcgagatgagggaggaggctgagggttgggaggtggac
tcggtagatcacggcggttctcgtcattctcagcaggtccttcctccattgccggcaggt
tgggaagagaaagtggataatctcggccggacgtattacgttaatcacaacaaccgaacc
acgcagtggaaaagacccagcacagttgacatggtatccgagacggaaagcgataatcac
ctgcgtcagatcaaccaggaagcgcacagagtgtttcgttccagacgtcatatcagcgag
gacctggagaacgaacacctcgacccccgagaccttgatgatcccctcccctcccagtcc
tgggaccctatcacagaagaggatttctcagggatgagtgaggctgtggctggccccgcc
cccgccccctctgccacacccattcatcagttcagcactccagagttttcagaggagatc
accatgaggctgtcactcacgcctaacaccaacggagaaatgagtggagcgaacaacacc
gggtctctcctgtcatccaggttgcgttcctccagtatgactgatggagtgagtgatcag
gctcagactccctcgcctatgacgtcgcagtccagacgaacccgagcccaaacggtcaca
ggcctagagcagcccatgtccctgccctcaggttgggaggagagaaaagacaccaagggc
cgaacttattacgtcaaccacaacaaccgcagcacgacgtggacacgccctattctccag
cacactgaggatggagtgagttctcctgcaggagctgtaggaggtgctgtagctactaca
ccttcgtccagcggccatcttagtgaaccccaaatacgccgacctcgtagccttagttcc
cccacagtcaccctgtccactcctccagagggagccaatagcgtgccgcatcctcgggcg
gtgaaggacacactctcgaacccgcagtcccctcagccttcgccttacagctcgcccaaa
tcccaacacaaggtcactcagagcttcctgcccccggggtgggagatgaggatcgccccc
aacggacgaccgtttttcatcgaccacaatagcaggacgaccacatgggaggatccacgt
ttaaagtaccccgttcacatgagggttaaaggagcgctggaccccggcgacctcggccca
cttcctccgggatgggaggagcgagtccacgcagatggaagaacgttctacatcgaccac
aacacaaagaacacacagtgggaagaccctcgactacagagtcccgctattacaggaccg
gccgtgccatactcgcgagagtttaaacagaagtatgattacttcaggaagaagttaaag
aagccagcggacattcctaaccgtttcgagatgaagctgcacagaggcagtatattcgag
gagtcctacaggcggatcatgtctctgaagaggccggacgttctgaagtcccgcctctgg
attgagtttgagtcggagaaagggctggactacgggggcgtggccagggagtggttcttc
cttatatctaaggagatgttcaacccttattatgggctgtttgagtactctgctacagat
aactacacactccagattaattcaaactcagggttgtgtaacgaggatcatctctcgtac
ttcaagttcatcgggcgtgtagcgggcatggcggtgtatcacggcaagctgctggacggt
ttcttcatccgacctttttataagatgatgctgggaaaacccatcacattgaatgacatg
gagtcagtggacagtgaatactacaactcactgaagtggattttggagaacgacccgacg
gagctcgacctgcgcttctgtatcgatgaggacaacttcgggcagacataccaagtggat
ctgaagccgagcgggtctgatctggtcgtcaccaacgacaacaagaaggagtatatcgat
ttggtgatacagtggcggtttgtgaacagggtacagaaacagatgaacgcctttatggag
ggattcacagaactgattctaatcgacttaattaagatcttcgatgagaacgagttggag
ttgctgatgtgtggtctgggtgatgtggacgttaacgactggagacaacacaccgtgtat
aaaaacggctactgtccaaatcaccccgtcatccagtggttctggaaggccgtgttgttg
atggatgctgagaagaggattcggctgctgcagttcgtcacaggaacgtctagagttcct
atgaatggcttcgctgagctctatggttcaaacgggccgcagttgtttaccatcgagcag
tgggggaccccagacaaactcccccgtgcacacacatgttttaaccgtttggatctgccg
gcttatgagacgttcgatgatctgagggagaagctgctgatggctgtggagaacgcacag
ggctttgagggagtcgactag
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