Ictalurus punctatus (channel catfish): 108278890
Help
Entry
108278890 CDS
T04658
Name
(RefSeq) tubulin beta chain isoform X1
KO
K07375
tubulin beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagocytosis
ipu04517
IgSF CAM signaling
ipu04540
Gap junction
ipu04814
Motor proteins
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108278890
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
108278890
09144 Cellular community - eukaryotes
04540 Gap junction
108278890
09142 Cell motility
04814 Motor proteins
108278890
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108278890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108278890
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108278890
04147 Exosome [BR:
ipu04147
]
108278890
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108278890
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108278890
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108278890
Exosomal proteins of colorectal cancer cells
108278890
Exosomal proteins of bladder cancer cells
108278890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
108278890
NCBI-ProteinID:
XP_017348113
Ensembl:
ENSIPUG00000024891
UniProt:
A0A2D0SZK9
LinkDB
All DBs
Position
1:complement(28452243..28455834)
Genome browser
AA seq
444 aa
AA seq
DB search
MREIVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYYGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQEMFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFDEEEEELA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatcgttcacatgcaagctggtcagtgtgggaatcaaatcggtgcaaaattt
tgggaggtgatcagtgatgaacacggaatcgacccgaccggtacctactacggtgacagc
gacctgcagctggagcggattaacgtgtattacaacgaagccactggtggaaagtatgtt
ccccgggctgtactggtggacttggagccagggaccatggactctgtaagatctggtcct
tttggacaagtgttcagaccagacaacttcgtgtttggtcagagtggggctggaaacaac
tgggccaaaggccattatactgaaggtgctgagctggtggactcggtgctggatgttgtg
cgtaaggaggctgagagctgtgactgcctacagggcttccagctcactcactccttgggt
gggggcaccgggtcgggcatgggcacgctgctcatcagcaagatccgtgaggagtatccc
gaccgcatcatgaacacgttcagtgttgtgccatctcctaaagtctcagacactgtggta
gagccctacaacgccactctgtctgtgcaccaactggtggagaatactgatgagacatac
tgcattgacaatgaagcactttatgacatctgtttccgcactttaaagctcacaactccc
acttatggcgatctcaaccatcttgtttctgccaccatgagtggtgtaaccacctgcctc
cgttttcctgggcagctcaacgctgacctgcgaaaactggctgtcaatatggtgcccttc
cctcgtctgcactttttcatacctggttttgccccactcaccagcagggggagccagcag
taccgtgcactcaccgtgcctgaactaacacaacagatgtttgatgccaagaatatgatg
gcggcgtgtgatccacgccatggccgctacctgactgtggctgctatcttccggggccgc
atgtctatgaaagaggtggatgagcagatgctcaatgtgcaaaacaaaaatagcagctat
tttgtggaatggatccccaacaatgtcaaaacagccgtatgtgacatcccaccaagaggg
cttaagatggctgccaccttcattggcaacagcacagccatccaggagatgttcaagcgc
atctcggagcagttcacagccatgttcaggagaaaggccttcctgcattggtacacagga
gaaggaatggatgagatggagttcactgaggcagagagcaacatgaatgaccttgtgtct
gagtaccagcagtaccaggatgccacagctgaagaggagggcgagtttgatgaagaggaa
gaggaattggcataa
DBGET
integrated database retrieval system