Ictalurus punctatus (channel catfish): 108278892
Help
Entry
108278892 CDS
T04658
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b
KO
K09312
homeobox protein CDX1/4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108278892 (cdx1b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108278892 (cdx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108278892
NCBI-ProteinID:
XP_017348078
Ensembl:
ENSIPUG00000018217
UniProt:
A0A2D0SZH3
LinkDB
All DBs
Position
18:complement(9248085..9260340)
Genome browser
AA seq
256 aa
AA seq
DB search
MYVSYLLDKESGMYPNAVRHPSLNLNPQNFVPATPQYTDFTGYHHHHHHHHVPGFNDANQ
TSSAYPAPPAPTREDWTPYGPSAAPNPSSNPGQIGFGPPDFPPSNLQPSTLLHPSISSTS
SSVAPLSPGEQRRNPYEWMRRSTAPPVNPGGKTRTKDKYRVVYTDHQRLELEKEFHYSRY
ITIRRKAELATALSLSERQVKIWFQNRRAKERKINKKKQQQPQASTTTPTPPGSNITSSS
AGLVSSSMPMTIKEEY
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgagttacctgttagataaggagagcgggatgtaccccaatgccgtgcggcac
ccaagcctcaacctgaaccctcagaacttcgtccctgccactcctcagtacacggatttt
accggatatcaccatcatcaccaccatcatcatgtccccggctttaatgacgctaaccag
acgagttctgcatatcctgctccacctgctcccactcgtgaagactggaccccttacggc
ccctcagctgccccgaacccgtcctccaacccaggacagatcggcttcgggccacccgac
ttccctccatccaacctgcagccttcgactcttcttcatccctccatcagctcaacatca
tcatcagtcgctccactctcacctggcgagcagcgcaggaacccgtacgagtggatgcgc
cggagcactgcaccgcccgtcaacccaggaggaaagaccaggacgaaggataagtaccgc
gtggtgtacactgatcatcagcgtctggagctggagaaggagtttcactacagccgctac
atcaccatcaggaggaaggcagagcttgccacggccctcagtctatcagagagacaggtg
aaaatttggtttcagaaccgacgtgccaaagagagaaaaattaacaaaaagaaacagcag
cagccacaggcttccaccaccacgcccactcctccgggctccaacatcaccagcagcagc
gcaggtctggtctcatcctccatgcccatgaccattaaagaagagtactga
DBGET
integrated database retrieval system
