Ictalurus punctatus (channel catfish): 108278893
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Entry
108278893 CDS
T04658
Symbol
csf1rb
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108278893 (csf1rb)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108278893 (csf1rb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ipu01001
]
108278893 (csf1rb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ipu04090
]
108278893 (csf1rb)
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108278893 (csf1rb)
Protein kinases [BR:
ipu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
108278893 (csf1rb)
CD molecules [BR:
ipu04090
]
Proteins
108278893 (csf1rb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set_CD47
DUF7809
Motif
Other DBs
NCBI-GeneID:
108278893
NCBI-ProteinID:
XP_017348079
UniProt:
A0A2D0SZI2
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Position
18:9267044..9289320
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AA seq
872 aa
AA seq
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MNREMLYAALIILLLPISTQSGDVYNNTVIVQDEESDVLLNCLPTLPSTTPFTLRMADGS
APPPDLNFTVDPKQGIVIRAPRPSHSGDYICSVLGNAVRQHSSVFQITIRKKVRVPPAVS
VEVDECVRVIGEKLQLTCNATNPDHSFIIKWQHSNTQTFLVNKTVKRSSDMVQVISVLTL
PHVNKPDSGNLTCIAKNTAGNKTATVSLRIAEKPYVSLTPLKPRGLNPTVELMEDETLDL
RVEVDAYPTIQDGRWSTPPATNTSNYVETLSTIHRSYRQVASLSIKRIKAHERGWYSFNA
QGANINATTHFKVHVYQKPSVMIEWRNGSLTCLASGYPALTIYWQQCEKMNNTCDRNRSS
VELQYEQYTLQQHDEFQSHTVRSVLLTPLSNTTVRCEAENTAGVGRSTISLPPLLYVYQP
PPDVWTSQMFLTIITATSVIATLLFILLGVCAYRCKQTPKYEIRWKIIEVSEGNNYTYID
PTQLPYNPKWEFPRDRLTFGQVLGSGAFGKVVEATALGLEKDDHITQVAVKMLKSSALSE
EKEALMCELKILSHLGSHANIVNLLGACTHGGPVLLITEFCSHGDLLNFLRRKAPLFINS
VFHTHEFSNIYKNLTRNLMERRNQINSYMDMQPGQRSRDCTQGEYSREARDPSALNIDHL
LRFSAHVAQGMNFLASKNCIHRDIAARNVLVSDSLVAKICDFGLARDIMNDSNYVVRGNA
RLPVKWMSPESIFECLYTVQSDVWSYGVLLWEIFSLGRSPYPDVVVDARFYKMIRCGYHM
SQPDFAPAEMYKIMKMCWSLEPTSRPTFNQIVQMIRTLLPENSEQQYKNIQQELEQKFDT
MNCVTVKMSETHQDKTPEEQRLLTHSNNYQLY
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgagagatgctttacgctgcactgatcatcctcctgctgcccatcagcacccag
agtggagatgtttataacaacacagtgattgtacaggatgaagagtcggacgtcctgctg
aactgtttacccacactccccagcactacacccttcacactccgcatggctgacggatct
gctcctcctcctgacctgaactttacagtcgatcccaaacagggaattgtgatccgagct
ccgaggcccagccacagtggagactacatctgcagcgtgctagggaacgcagtgcggcaa
cattcatcagtcttccaaatcaccatcaggaaaaaagtgcgtgtccctccggctgtatct
gtggaggtggacgagtgtgtccgagtcattggagagaaactgcagctcacctgcaatgcc
accaaccccgatcactccttcatcatcaaatggcaacactccaacactcagacatttctg
gttaataagacagtgaagaggagcagtgacatggttcaggtgataagtgtgctcactctt
cctcatgtgaacaaacccgattccggcaatctgacctgcatcgccaaaaatacagcgggg
aataaaaccgcaaccgtctcgctccgaatcgcagagaagccgtacgtgtctctgacaccg
ctgaagccgagaggtttaaatcccacagtggagctgatggaggatgagacactggacttg
agggtagaagtcgacgcttatcccaccatccaggacgggaggtggagcacaccaccagct
acaaacacctccaactatgtggagacgctctccaccatccacagaagttacagacaagtc
gcttcactgtccataaagagaatcaaagcacatgagcgtggctggtacagctttaatgcc
cagggtgccaatattaatgccacaactcactttaaagtccatgtctaccagaagccgagt
gtcatgattgaatggaggaacggttctttaacctgtttggcctcaggttatccagcactg
actatttactggcagcagtgtgagaaaatgaacaacacctgtgatagaaacagatcgtct
gtggagttacagtatgaacaatacacactacagcaacacgatgagttccagtcccacaca
gtgcggagtgtgttactgactcccctcagcaacaccacggtcaggtgtgaagctgagaac
actgctggagtcgggcggagcacaatcagcttacctcctctactctatgtttatcaacct
ccacctgatgtctggacatctcagatgttcctcaccatcatcacagcaacctcagttata
gcgacactgctcttcattttgctgggggtttgtgcgtacaggtgtaagcagacaccgaaa
tatgagatccgatggaaaatcatcgaggtgagtgaggggaataattacacgtacatcgac
cccactcagcttccctacaaccccaagtgggagtttccccgagacagactgacgttcggt
caggttctgggctctggggcgttcggtaaagtggtggaagcgacggcgttgggtctagag
aaggatgaccacatcactcaggtggctgtgaaaatgctgaagtccagcgctctctcagag
gagaaagaagctctgatgtgtgagttgaagattttgagtcatctcggatctcatgccaac
atcgtcaacctgctgggagcctgtacacatgggggtcccgtgttgttaataacggagttc
tgcagtcacggagatctgctcaacttcctgcgcaggaaagcgccactttttattaactca
gtgttccacacacacgagttctccaacatctacaagaacctgacgaggaacctgatggag
agacgcaaccagatcaacagttacatggacatgcagccaggtcaaaggtcaagagactgt
actcagggagagtatagcagagaagcgagagatccatcagcactcaacatcgaccacctg
ctgaggttctccgctcacgtggctcagggcatgaacttcctcgcatccaagaactgtatc
cacagagacattgctgctagaaacgtcctcgtgtccgactctctggtggcgaagatctgt
gacttcggtctggcgcgtgacatcatgaacgactcgaactacgttgtgagaggaaacgcg
cgcctgccggtgaagtggatgtctccggagagtatattcgagtgtctctacacggtacag
agtgacgtttggtcgtatggggttctgctgtgggaaatcttttctctcgggagaagtcca
tacccggatgtggtggtcgatgctcggttctataagatgatcagatgtggatatcacatg
tcacagccggattttgcccctgctgagatgtacaaaataatgaagatgtgctggagtctt
gagccgacctcgagaccgaccttcaaccaaattgtccagatgatcagaacgctgctgccg
gaaaactcagagcaacagtataagaacattcaacaggagcttgaacagaagtttgacacg
atgaattgtgtaacagtcaaaatgagcgagactcatcaggacaaaactccggaagagcag
cgtctgctcacacactccaataactatcagctttactga
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