Ictalurus punctatus (channel catfish): 108278935
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Entry
108278935 CDS
T04658
Name
(RefSeq) coronin-6 isoform X4
KO
K13886
coronin-1B/1C/6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108278935
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108278935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_EML
Beta-prop_IFT140_1st
NBCH_WD40
eIF2A
MIOS_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
108278935
NCBI-ProteinID:
XP_017348192
Ensembl:
ENSIPUG00000019371
UniProt:
A0A2D0SZU5
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All DBs
Position
18:10913807..10940135
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AA seq
450 aa
AA seq
DB search
MSRSIVRQSKFRHVFGQAAKAEQSYDDIRVSKVTWDSSFCAVNPKFLAVIVESSGGGAFL
VLPLSKVGRVDKNYPLVVGHSGPILDIDWCPHNDNILASGSEDTTAMIWQIPDHTPTRPI
SEPIVVLEGHSKRVGIVSWHPTARNILLTAGSDNLIIIWNVGTGEPIISMEDHPDLIYNV
SWNHNGSLFCTTCKDRRLRVCDPRKREVVAERLAPHEGIRPMRAIFTREGNIFTTGFTRM
SQRELGLWDPTNFEEPIALLELDTSNGVLLPFYDPDTSLVYLCGKGDSSIRYFEITDEPP
YVHYLSTYSSKEPQRGMGFMPKRGVDVSKCEIARLYKLHERKCEPIMMTVPRKSDLFQDD
LYPDTAGPDPALEPEEWLEGRDEDPILVSLKDGYMPPKSRELKVAKKNLLDPRPAPRRSM
SSVDGSSLPVVAGDSRHSRMSMTVTKASQR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcagtattgtgcgccagagtaagttccggcatgtttttggtcaagctgcgaag
gcggagcagagttacgatgatattcgggtttccaaggtgacgtgggacagctcgttctgt
gcagtcaacccgaagttcctggcagttatagtggagtcaagtggaggaggagcctttttg
gttttgcccctttcaaaggtgggacgtgtggataagaactatcccctggtggtgggacac
tccgggcctatcctggacattgactggtgtccccacaacgacaacattttggcaagcggc
tctgaagacaccactgccatgatatggcagatcccagaccacactccaacccggcccatc
agcgagcccattgtggtactggagggccactccaaacgcgtgggcatcgtcagctggcac
cccactgcccgcaacatccttctcactgcaggcagtgataatctgatcataatctggaat
gtgggcaccggagagccaataatctcaatggaagatcacccagacctcatctacaacgtc
agctggaaccacaacggaagcctgttttgcacaacttgcaaagaccgccgccttcgtgtt
tgtgacccccgcaagagagaggtagtcgctgagagactagcaccacatgaaggcatcagg
cccatgagagccatcttcaccagagagggaaacatcttcactacaggctttaccaggatg
agtcagagggagcttggcctttgggacccgacgaatttcgaggaacccattgcccttttg
gagttggacacaagtaatggggtcttattgccattctatgatccagataccagcctggta
tatctgtgtggtaagggggacagcagcattcgctattttgagatcacagacgagccaccc
tatgtgcactacctcagcacatacagtagcaaagagccacagcgaggcatgggcttcatg
cccaagagaggagttgatgttagcaagtgtgagattgccagattatacaagcttcatgag
aggaaatgtgaacctataatgatgacagtccctagaaagtcagatctgttccaagatgac
ctctatccggacacagcaggcccagaccctgcactggagcctgaagagtggctggagggg
cgagatgaagaccccatcttagtctccttgaaggatggctacatgcccccaaagagcaga
gagctaaaagtggccaagaagaatcttctggaccccaggcctgcaccccgcaggagcatg
tcgtctgtcgatggaagcagcttgccagtggttgcgggagacagccggcactctcggatg
agcatgacggtgacaaaggcatcacagaggtga
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