Ictalurus punctatus (channel catfish): 108278947
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Entry
108278947 CDS
T04658
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108278947
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ipu04031
]
108278947
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
108278947
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
108278947
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
108278947
NCBI-ProteinID:
XP_017348229
Ensembl:
ENSIPUG00000014058
UniProt:
W5UI16
LinkDB
All DBs
Position
2:19857656..19876684
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AA seq
278 aa
AA seq
DB search
MGSQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARSYAEKNAMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANSGGSKGNSLKRSKSIRPPQSPPQNCTRNNCKIS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgggatctcagggcagcccggtgaagagctacgactacctgctgaagttcctgctggtg
ggagacagtgatgtggggaaaggggagatcttggacagcctgcaggacggatctgccgag
agtccatacgcctacagcagcggaatcgattataagaccaccacaatcctgctggacgga
cggagagtgaagctggagttgtgggacacttcaggccaaggccgcttctgtaccattttc
cgttcctactccagaggtgcacaggggatcctgttggtgtatgatatcactaaccgctgg
tcctttgacgggatcgaccgctggattcgagagatcgatgagcatgctcctggggttcct
cggatcctggtcgggaaccgcctgcacttggcgttcaaacgtcaggttcccacagagcag
gctcgctcctacgcggagaagaacgctatgaccttcttcgaagtgagtccgctctgtaac
ttcaatgtcatcgagtcgttcacagagctgtctcgcatcgtgctcatgagacacggcatg
gagaagttctggaggcccaaccgagtgttcagcctgcaggacctgtgctgtcgcgccatt
gtgtcgtgcacgccggtgcacctgatcgacaagctgccgctccccgtcgccatcaagagt
cacctgaagtccttctccatggccaacgggatgaacgccgtcatgatgcacggacgctcc
tactcgctggccaacagtggtggcagcaaaggcaacagcctgaaacgctccaaatccatc
cggccgccgcagagcccgcctcagaactgcacccgcaacaactgtaagatctcctag
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