Ictalurus punctatus (channel catfish): 108278948
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Entry
108278948 CDS
T04658
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A/B isoform X1
KO
K13044
heterogeneous nuclear ribonucleoprotein A/B/D
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108278948
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
108278948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
CBFNT
RRM_PARP14_3
RRM_PARP14_1
RRM_3
Nup35_RRM_2
RRM_11
RRM_Nup35
DUF2462
Motif
Other DBs
NCBI-GeneID:
108278948
NCBI-ProteinID:
XP_017348227
Ensembl:
ENSIPUG00000020220
UniProt:
A0A2D0SZY1
LinkDB
All DBs
Position
18:11733991..11741171
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AA seq
326 aa
AA seq
DB search
MADDSEQQFMETSENGNGEEELNGATGADTQLEAGGEAAEAESQNGAADGGQIEASKAEE
DAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFKEAASVEKV
LQQKEHRLDGRQIDPKKAMAMKKDPVKKIFVGGLNPETTEEKIREYFGAFGEIESIELPT
DPKTSKRRGFVFITYKEESSVKKVLEKKYHTVNGSKCEIKVAQPKEVYQQQQYGGRGGGY
GGRGRGRGGQHQNWNQGYGNYWNQGYGNQGYGYGGQQGYGNYGGYGNYDYSPGYYGYGGG
YDYNQGNTSYGKTPRRGGHQSSYKPY
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacagtgagcagcagttcatggagacctcggagaacggaaacggagaggag
gagctgaacggagcgacgggcgcggacacccagctcgaggcgggaggagaggccgctgag
gccgagtcgcagaacggagcggcggatggagggcagatcgaagctagcaaggcagaggag
gacgccggcaaaatgtttgttggcggtcttagctgggacacgagcaaaaaggatcttaag
gattacttctcaaagttcggtgaggtaacagactgtaccatcaaaatggactctaacacg
ggccggtcacgtggttttgggttcatcctcttcaaagaggcagcaagtgtggaaaaggtg
ttgcagcaaaaggaacaccggctagatggaagacagattgatcccaagaaagcgatggca
atgaagaaggatcctgttaaaaaaatatttgttggcggactcaaccctgagactacagaa
gaaaagattcgggaatactttggggcttttggcgagatcgaatctattgaacttcccacg
gatccaaaaacaagcaagagaaggggtttcgtctttattacttataaggaggagtcgtct
gtcaagaaagtcctagaaaagaaataccatactgttaatggaagcaagtgtgaaattaaa
gttgcccagcctaaggaggtctaccagcagcagcagtatggtggtcgtggtggtggctac
ggaggtcggggcaggggtcgtggtggccaacaccagaattggaaccagggatacggcaac
tactggaaccagggctatggcaatcagggatatggctatggtggacagcaaggctacggc
aactatgggggttatggcaactatgactattctcctggctactatggctatggtggtgga
tatgactacaaccagggcaatacgagctatgggaaaactccaagacgtggaggccaccag
agtagctacaagccatactga
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