Ictalurus punctatus (channel catfish): 108279034
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Entry
108279034 CDS
T04658
Symbol
arrdc1b
Name
(RefSeq) arrestin domain-containing protein 1b
KO
K26228
arrestin domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108279034 (arrdc1b)
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
108279034 (arrdc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arrestin_C
Arrestin_N
Vps26
LDB19
Spo0M
Motif
Other DBs
NCBI-GeneID:
108279034
NCBI-ProteinID:
XP_017348423
Ensembl:
ENSIPUG00000010230
UniProt:
W5UF05
LinkDB
All DBs
Position
18:complement(3759514..3807475)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKLQEFDITFSHNKVVYSPGETISGTLRILTANSLQYKAIKLNCVGSCGISNKMNDTSW
MMEEQYVSSMLSVADKGTLPPGEHSFPFQFLIPTHAPTSFEGPYGKVMYRIRAVIDTPRF
SKDYKCQRPFYLLNLLNLNELPDIEQPSSAVTTKKFTYLLVKTGTLMLRAHSDLRGYTPG
QIIKLSTEIHNKSGKDTGYVLASLIQKVTYKMKRPLFDLRTIAEVEGAGVKGGKHAEWKE
QIIVPPLPQSGLAGCSLIDIEYFIQVSLKSPETVVTLPIYIGNIAVNLTPTRPPPPTPLQ
HGAAMPTMPSLSPGLVVPSAPPAEDDEDEVLGAGALSSEEIPTKSHSQQDHSGQAIPMSP
GAFSHAPAQALPQGQQGQPSESSAPLFCVSTGATIPFFTDGNATPMPTTCPLILPPEYSN
WDYPHEPPPTYEESCSSTNSSFNTSMT
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagctacaggaattcgacattactttcagccacaacaaagtggtgtacagcccg
ggagagacgatttcgggaacgctgaggatcctcaccgccaactcgctgcagtacaaggcc
atcaagctgaactgcgtgggctcctgtggtatctccaacaagatgaacgacacttcatgg
atgatggaggagcagtatgtcagcagcatgctctctgtggcagataaaggaaccctacca
cctggagagcacagcttcccttttcagtttctcattccaacacacgctcccacttcgttt
gagggcccgtacggaaaggttatgtacagaatcagggctgtaatagacacgccacgcttc
tctaaggactacaagtgtcagagacccttctacctactcaatctcttgaatctcaatgag
ttgcctgatatagagcaaccaagtagtgcagtgacaactaagaagttcacctacttactg
gtgaagacggggacgctcatgctgagagctcacagtgacctgagaggatacacgccaggc
caaatcatcaaactctctacagagatccacaacaaatcaggaaaagacacaggctatgtc
ctggctagtctcatacagaaagtgacctataagatgaagcggccgctgtttgatttgcgg
accatagcggaggtagagggggcaggcgtcaaaggagggaaacatgcagaatggaaggag
cagatcatcgttcctcctctccctcagtctggcctagctggctgcagcctcatagacatc
gagtactttatccaggtttcactaaaatctcctgagacggtggtcactctgcccatctac
attggaaacattgctgtcaacttgaccccaacaagaccgcctccaccaacccctctccag
cacggtgctgcgatgcccaccatgccaagccttagccctggactagtggtaccaagtgcg
cccccagccgaggacgacgaggacgaggtgctgggcgcaggagcactaagcagcgaggaa
attcctaccaagagtcactcccagcaggaccattcaggccaggccattcccatgtcccct
ggggcgttcagtcacgctccggcccaagcccttcctcagggtcagcaaggccagccatcc
gagagctcggcgcctcttttctgtgtctccacgggggccaccattccctttttcactgac
ggtaatgccacgcctatgcccactacctgccctctcattctgcctccggagtacagcaac
tgggactatccgcatgaaccacctcccacttatgaggaaagctgcagcagtaccaactcc
agcttcaacaccagcatgacgtag
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