Ictalurus punctatus (channel catfish): 108279045
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Entry
108279045 CDS
T04658
Symbol
abraxas1
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108279045 (abraxas1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108279045 (abraxas1)
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
108279045 (abraxas1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MPN_2A_DUB_like
DUF5662
EncFtn-like
JAB
DUF1192
DUF5798
DUF643
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
108279045
NCBI-ProteinID:
XP_017348450
Ensembl:
ENSIPUG00000003772
UniProt:
A0A2D0T1H6
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All DBs
Position
18:20011003..20017693
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AA seq
393 aa
AA seq
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MEEYSTTVRTSGFVLSSLMFQHLNSDCDVEGLLLGESVGEEKSKITDSQTDHIQFVHTIN
IQKHITCRSTHSFYNNTCEVDKEKIRQVLSNLKEENVIGWYRQRRNTSQQMTLKEQLVHQ
NLRKLLPYQELVFLLLTPSEVTMSHSTHRLEYTAFIWSGSQYSSIPVSVSNLGTLEQQDY
WRVSATCPALSHCQSIKQHRAKFFSSEQDLREVEKVNDMNDALLDEMKSACVSVEKSERR
VEKLQAEIAELREAVRERVNKKQDSDTVESSSHEGPKENVLLCAALKALFPDTPSLCSRT
LSVEGFPVLHMCCTEEHGIDVPSRLPLMLLQCGHTTRKRGSGNRTKGKFQSAGVSRKGKK
RKADTELSEPLSENGSDTEVELSSPNQSNSPVF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatatagcaccactgtgaggacatccggattcgttttgagttcgttgatgttt
cagcatctgaacagtgactgtgatgtggagggattattactcggtgagagtgtcggagag
gagaaaagcaaaatcactgactcacagacggatcacatacaattcgtgcacacaataaat
attcaaaaacacatcacgtgcaggagtacacacagcttctacaacaacacctgtgaagtg
gacaaagagaagattagacaggttctgtccaatctcaaagaggagaatgtgattggctgg
tatcggcagcggaggaacactagtcaacaaatgactttaaaagagcagttggttcatcag
aatttgaggaagctgctgccataccaggagctcgttttcttgctgctcacgccgtctgag
gtgaccatgtcgcactccacccaccgcctcgagtacacagccttcatatggagcggcagt
cagtacagtagtatcccagtctcggtgagcaacctgggtacactggagcagcaggattac
tggagagtctctgctacatgtcccgctctgagtcactgtcaatccataaaacaacacaga
gccaaattcttctcttcggagcaggatctccgagaggtggagaaagtcaacgacatgaac
gacgccttgttagatgaaatgaagagtgcgtgcgtgagcgtggagaagagcgagcggcgc
gtggagaagctacaggccgagatcgcagagctcagagaagccgtccgagagcgggtgaac
aaaaagcaagacagtgacaccgtagaaagttcttctcatgaaggacccaaggagaacgtc
ctgctgtgtgcggctctgaaagcgctgttccccgacacgccgtcattatgcagccggact
ctgagtgtcgagggtttccccgtcctgcacatgtgctgcacagaggagcacggcatcgac
gttccctccagactgccgctgatgctactgcagtgtggtcacaccacgaggaagaggggc
tcgggtaacaggacaaaggggaaatttcagtccgcaggcgtctcacggaaaggtaaaaag
aggaaggcggacacagagctgagcgagccgctgtccgaaaacgggtctgacacggaggtg
gagctgagcagcccgaaccaaagcaactccccggtgttttaa
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