Ictalurus punctatus (channel catfish): 108279063
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Entry
108279063 CDS
T04658
Name
(RefSeq) junction-mediating and -regulatory protein isoform X1
KO
K24045
junction-mediating and -regulatory protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108279063
Membrane trafficking [BR:
ipu04131
]
Autophagy
Other autophagy associated proteins
Others
108279063
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
Motif
Other DBs
NCBI-GeneID:
108279063
NCBI-ProteinID:
XP_017348493
Ensembl:
ENSIPUG00000014252
UniProt:
A0A2D0T0P4
LinkDB
All DBs
Position
18:6552482..6588645
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AA seq
872 aa
AA seq
DB search
MSFTMEESLESGWVSVRPNVFEEKEKHKFVFIVAWNDIEGKFAVTCHDRTVQKRSAGARD
SVAEVAEGGGTLLQDKRPVASKSSREKSTDKSNKHARSPSKTAALADIEVLEPASVADTD
ARSQDDADAGVPVIVDSSWAGLFSFQDLRAAHAQLCAVNSDLEPCLPPFPEHEHQSAMWS
VLFGVAEVTRRDTEALCYQLQVYLGHALDTCGWKILSQVLFADGDDSEEYYESLSELRQK
GYEDALQRQKKRLHELLEKQRGMESMVELLQLYSEQDEAYGDLVEATTELYHYLLQPFRD
MRELAMLRRQQIKISLETEYLGPRRIEALRREDEDWQRKAHTAVLSIQDLTVKYFETTAR
AQKVMSERMRADQRKFGKAAWGAAVERMEKLQYAVSKETLQLMRAKEICLEQRKHGLREE
MQGLQDGEDAMARLDQLEALYYELQLQLYEIQFEILKYEELLLTAQLQSLRRQMTERQDE
VVYYDAYESPDALQATDDTSLALAPLRDEVTQLQLRTRQLEARRGRITAKKAYLKTKKEI
CIVNHTQKVQQRQSGQDHDSQHALRQQDEEEEEEVRNTRVSQERQKTLDRLRSFKQRYPG
QVTLKSARLRLAHARKKNGAGQTTAKEGQPQMQVASVQTDDAPASLKDSAAVPELQRPEG
FMSLPSNIPPIPETLGPSSLPTLTERNVLDSSTSPISPPPPPPPPPPPPPSLEDTPGLGQ
GQGQGHVSSPVSQPKAESPLGPFSARFFDSSQLVNARKKLRKTSSLESSQWRRASSPMDE
VLASLKRGSFHLRKAELRVLAPDPDQDDGNNILAQIRRGVKLRKVRHHEQQRCLESSDPL
TRSIHEALRRIKEASPESESEDEGLPCTDWES
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcacaatggaggagtctttggagtccggttgggtttcagttaggccgaatgtc
ttcgaggaaaaagagaagcacaaattcgtcttcatcgtggcttggaacgacatcgagggc
aagttcgcggtcacctgccacgaccggacagtgcagaagcgcagcgcgggggctcgggac
tcggtggccgaggtggcggagggaggcggcacgctgcttcaggacaaacgtcccgtggcg
tcgaagagctcgagagagaaatccacagataaatccaacaagcacgcgcgaagcccgagc
aaaactgccgcgctcgctgacatcgaggttctcgagcccgcgtccgtcgccgacaccgac
gcgcgttctcaggacgacgcggacgccggcgtccccgtaatcgtcgactcgagctgggcc
ggcctgttctccttccaggacctgcgtgcggctcacgcgcagctctgcgcggtcaactcg
gacctcgagccgtgcctgccgccgttccccgagcacgagcatcagtcggccatgtggtca
gtgctgttcggcgtcgcggaggtcacgcggcgcgacacggaggcgctctgttaccagctg
caggtgtacctgggccacgcgctggacacgtgcggctggaagatcctctcccaggtgctg
ttcgcggacggggacgattctgaggagtactacgagagcctgagcgagctgcggcaaaag
ggctacgaggatgctctgcagcggcaaaagaagcgccttcacgagctgttggagaagcag
cgaggcatggaaagcatggtggagctgctgcagttgtactcggagcaggacgaggcgtac
ggcgatctggtggaggccaccactgaactctaccactacctgctgcagcccttcagagac
atgcgagagctcgccatgctgcgccgacagcaaataaagatctctctggagacggagtat
ctgggtccacgccggatcgaggcactcagacgggaggatgaggactggcagaggaaggcc
cacactgcagtgctgtctatccaggacctcactgtgaagtactttgagaccacggcacgg
gcacagaaagtgatgtccgagcgcatgcgagccgaccagaggaagttcgggaaggcggcg
tggggtgcagcagtggagcgcatggagaaactgcagtatgctgtttccaaggagacactg
caactgatgcgcgccaaagagatctgcctggaacagaggaagcatgggctgagagaggag
atgcaggggctacaggatggcgaggacgcgatggcgcgcctggaccagttagaggcgctg
tactacgagttgcagctgcagctctatgagatccaattcgagatcctgaagtacgaggag
ttgctgctgactgcgcagctgcagagcctgcgcagacagatgacagagcggcaggacgag
gtggtttactacgacgcgtacgaaagtcctgacgccctgcaggccactgacgacacgtct
ctcgctcttgctcctctgcgagacgaggtcacccagctgcagctgaggacacggcagcta
gaggccaggaggggtcgcatcactgccaagaaagcctacctcaaaaccaaaaaggaaatc
tgcatcgtcaatcacacccagaaagtgcagcagcgccagagcggccaggaccacgactcc
cagcatgctttgcggcagcaggatgaagaagaagaagaggaggtgaggaacacacgagtt
agccaagagagacagaagacgctggacagactgcgcagctttaaacagcggtacccaggc
caggtcacgctgaagtccgcacgccttcggctagcgcacgccagaaagaaaaacggcgcc
gggcagacgactgcgaaagagggccagccccagatgcaggtggcgagcgtgcagacggac
gacgccccggcttctctgaaagactccgctgctgtcccggagctccagagacccgaagga
ttcatgtctttaccctcaaacatcccgcccatcccagaaacactcgggccgtcctcgctg
cccacgctcaccgagcggaacgttctggactcatccacttctccgatctctccccctccc
ccacctcctcctcctccacctcctcctccctctctggaggacacgcccgggctgggacaa
gggcaaggacagggacacgtgagcagcccggtgtcccaacccaaagcagaaagtcccctc
ggcccattctccgctcgctttttcgacagcagtcagctggtgaacgcgcgcaaaaagtta
aggaagacgtcctctctggagtcgtcccagtggaggagagcgtcctctcctatggacgaa
gtcctggccagcctgaagcgcgggagtttccaccttcgcaaagctgaactgcgcgttctc
gctccagatccggaccaggacgacgggaacaacatcctggcacagatccgacgcggcgtg
aagctcaggaaggtgcggcatcacgagcagcagcgctgtctagaatccagcgacccgctc
acacgcagcatccacgaagccctgcgccgcatcaaagaggcttcacccgagtccgagtct
gaggacgaggggctgccgtgcaccgactgggagagctag
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