Ictalurus punctatus (channel catfish): 108279075
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Entry
108279075 CDS
T04658
Symbol
hif1al2
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like 2 isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04137
Mitophagy - animal
ipu04140
Autophagy - animal
ipu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108279075 (hif1al2)
04137 Mitophagy - animal
108279075 (hif1al2)
04148 Efferocytosis
108279075 (hif1al2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108279075 (hif1al2)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108279075 (hif1al2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HIF-1a_CTAD
bHLH_HIF1A
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
108279075
NCBI-ProteinID:
XP_017348520
Ensembl:
ENSIPUG00000021158
UniProt:
A0A2D0T1P3
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Position
18:complement(13250639..13262581)
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AA seq
606 aa
AA seq
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MCLECRKARSRVAAQSRREKESQLLRELAALLPLAPSEADQLDKASVIRVTISYLHLRAL
LDIPDSTTVGAMMHPISASQGELPESIEKWFLDTLEGFLLLLSLCGKIIFITKDAVSHIG
IKQTDLIGRSLFDFIHPSDHKEIKEILTRIIGSEDQQKCEVFLRIKGAVKNMLTPWQVIH
CTGNKKSSPIPGSSYLLLLCRSLPVQEVIEMEAHLNFKTFLSIHEPDMKFTYCHSGVLEL
TGFSDVELYGQSVYQYYHPSDCQHIFKAHLCLFSKGQVYTGKYRLLQKHGGYVWVETDAT
VVYNIHTGNPERIVCINYILSGVELPDVVFSLEQTKCLLNVFHPPYTTMTHNETISTTTD
MDTSFVASPCERDKPTNSSTEILHRAALCGSLSNDMYDLDLDSLAPYIPTHEEDFHLTPI
LDGVASDSVLNRHLPSLNETWLTLDAELPTDSETVFSHRVNMNKNPMLVSSSQWHDSTYT
MNKKQQVRFKRQISIPEKKTNHWTDVSQHLAKTFSENFVWNCSQSYAEPLHLAYKYAKRS
WCPPGSSTQHSNQNTEGKMPSVLVNLPVLSRWECEVNAPLGPTSHLLQGTELITVLDQVA
SGLCWY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttagagtgtaggaaggcccggtcccgtgtggcagctcaaagcagacgggagaaa
gaaagccagctgttaagagagttagcggccctgctgcccctggccccatctgaggcagat
cagctggataaagcctctgtcattagagtcacaatctcctacctgcacctcagagctcta
ctggacattcctgactccactacagtaggagctatgatgcatcctatctcagcaagtcag
ggggaactgccagaatcaatcgagaagtggttcctagatacacttgaaggattcctgctc
ttactttccttgtgtggaaagattatcttcatcacaaaggatgccgtctctcatatagga
atcaaacagacggatttgattggccggagtttgtttgatttcattcatccctccgatcac
aaggagatcaaggagattcttacaaggataatagggagtgaagaccagcagaagtgtgag
gttttcttacgaatcaaaggtgctgtcaaaaacatgctgactccctggcaggtgattcac
tgcacaggaaacaaaaagtcatcacctattccaggatccagctatctgcttctcctgtgc
agatcattacctgtgcaagaagtaattgagatggaggctcatctgaatttcaaaacattc
ttgagcatccatgagccagacatgaagttcacctactgtcactctggggtcttggaactg
actggctttagtgatgttgagctgtatggtcagtctgtgtaccagtactatcatccatct
gattgccagcatatcttcaaggcacacctctgtttgttctcaaagggccaggtgtacact
gggaagtatcggctcctacagaagcatggtggctacgtttgggtagagacggatgccaca
gttgtgtacaacattcacacagggaatccagagagaatcgtgtgcatcaactatattctc
agtggagtggagctaccagatgtggtgttttcactggaacagacaaagtgcctgctgaat
gttttccatccaccatacactacgatgacacataatgagaccatatctacaaccactgac
atggacaccagctttgtggcctctccctgtgagagagacaagccaaccaacagttcaact
gagattttgcacagggctgctttgtgtggctcactttccaacgacatgtatgacctggat
ttggatagtctagccccatacattcccacacatgaggaggacttccatttaactcctatt
ttagatggagtggcaagtgattcagtattaaacagacacctgccttctctcaatgagaca
tggttaactctggacgcagagctgcccacagattcagaaacagtcttttcccacagggta
aacatgaacaagaaccctatgctcgtttcatcaagccagtggcatgacagcacatacaca
atgaacaaaaagcaacaggtgcggtttaagagacaaatctccattcctgaaaaaaagacc
aatcactggacagacgtctctcaacatcttgctaaaacgttctcagaaaactttgtctgg
aattgcagccagagttacgcagagccattgcatttggcctacaaatatgccaaacgctcg
tggtgtcctccgggatcttcaacgcaacatagcaaccaaaacacagagggaaaaatgccc
tctgtgttagttaacttgcctgtactgagcaggtgggaatgtgaagtgaatgcgcctctg
ggacccacttcacacttgcttcaagggactgaactcatcaccgtcttggatcaggttgcg
tcagggttgtgctggtactaa
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