Ictalurus punctatus (channel catfish): 108279084
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Entry
108279084 CDS
T04658
Symbol
nectin3b
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecules
ipu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108279084 (nectin3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108279084 (nectin3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108279084 (nectin3b)
04090 CD molecules [BR:
ipu04090
]
108279084 (nectin3b)
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
Nectin family
108279084 (nectin3b)
CD molecules [BR:
ipu04090
]
Proteins
108279084 (nectin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ig
V-set
Ig_3
C2-set_2
I-set
Ig_2
RCR
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
108279084
NCBI-ProteinID:
XP_017348538
Ensembl:
ENSIPUG00000005476
UniProt:
A0A2D0T0T2
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All DBs
Position
18:complement(21452912..21527032)
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AA seq
616 aa
AA seq
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MELLLRSFQTSGLREKEKERERSEAGGDMALGETVRYLRNKPEQPGTQFTLLLLLAFACG
VCGSQVVVPPKVSGVLGKNVTLSCRVEVDDNLSLTQSSWERRLPSGWVTVAVYNPMFGIS
IQPEYERRLSFRAPSTSDATIVLEDVGFSDAGDYICKASTFPLGIAQASITLSVLVEPKV
YISAGSAALLDGGNRTTVATCIAERARPKADVFWESQLYGMSEMHTQEDGNGTTTTQVHY
IWEPTRDAQGDALTCVVRHPALPSEFRMPYNINVQFAPDILLLGYDGDWYVGRENVQLKC
QVKANPPAHLFKWIRLDGEMPDGVAVVNNSLTFLRPLQRNDSGVYRCEVGNNIGLRTRDL
RIRIQDPPSTTTMPPTTPVLLPNADISVTAPGNKQPALFTSPTLAPLHEGNLGTIVGGAV
GGVLFLLLFLVLVGVCYQRRRRTFRGDYYTKQYLGPSDMQKAPPPPSHELHIYNEADRAS
PDTKLKSCHDVNGTILSDKDREEWGGFERERSPNSRSRALREANAQQNLQNHQNHNQQQS
YQPNHHPAPQPNHQPNHPSFLNTPHKHRSSLPPESRRYPGPQVMGNGSPFLPEDCYDSDY
VSHTDGSMISRREWYV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggagttgttgctgaggagctttcagacttcagggctgagagagaaggagaaggagaga
gagcgaagtgaagcgggcggtgacatggcgcttggagagactgtccgttatctcaggaat
aaaccagaacaaccgggaacgcaatttacactccttcttcttctggccttcgcatgtggt
gtgtgtggcagccaggtggtggtgcctcccaaggtgagcggcgtgctggggaagaacgtg
actctgagctgcagggttgaggtggacgacaatctgagcctgacgcagagctcgtgggag
aggcgcctgccgtccggctgggtcacagtggccgtgtacaaccccatgttcggcatctcc
atccagcccgagtacgagcgccgcctgtctttccgcgcaccctccaccagcgatgccacc
atcgtgctggaggatgtgggtttctcagatgccggtgactacatctgcaaggcgtcgact
tttcctctgggcatcgcacaagcctccatcaccctcagcgtcctcgtggagccgaaggtg
tacatatccgccggttctgcggctctattagacggaggaaaccggaccaccgtagctacg
tgcatcgccgagcgtgcccgtcccaaggccgacgtcttctgggagtcgcaactgtacggc
atgtcagagatgcacacgcaggaagacggaaatggcaccacaaccacgcaggtgcactac
atctgggagcccacacgtgacgcccagggcgacgccctcacctgtgtggtgagacacccg
gccctgccgagtgaattccggatgccttacaacatcaacgtgcagtttgcaccggacatc
ctgctgctgggctacgatggggactggtatgtggggcgggagaacgtccagcttaagtgt
caagtcaaagctaaccctccggcccacctcttcaaatggatcaggctggacggtgaaatg
ccagacggcgtagcggtggtgaataattccctgacgttcctgaggccactacagaggaac
gactccggcgtgtacaggtgcgaggtgggaaataacatcggcctgcgcacccgtgacctc
aggatccgtatccaagatcctccttccaccaccactatgcctcccaccacccctgtgctc
cttcctaacgccgacatctctgtcacagcgcctggcaataagcagccggccctcttcacc
tccccgaccctggcgccgctgcacgaaggcaacctgggcaccattgtgggcggggcggta
ggcggagttcttttcctgttgctgtttctggtgctcgttggagtttgctaccagcggcga
cgacgcacctttcgtggagactactacaccaagcagtacctgggtccttcagacatgcag
aaagcaccgccgccaccatcacacgagcttcacatctacaacgaggcggacagggccagt
cccgacaccaagctcaaatcgtgccacgacgtcaacggcaccatcctctctgacaaagac
cgggaggagtggggtggctttgagcgggaaagatccccgaacagccgcagtcgagctttg
cgagaggccaacgcccagcaaaacctccagaaccatcagaaccacaatcagcagcagagc
taccaacccaaccaccacccagcgccccagcccaaccaccaacccaaccacccgagcttc
ctcaacacccctcacaagcacaggagctcactcccgcccgagtcccgcagataccctggc
cctcaggtgatgggaaacggctcccccttcttgccggaggactgctatgacagtgactac
gtgtcacacacagatggctccatgatctcccgccgagaatggtacgtctaa
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