Ictalurus punctatus (channel catfish): 108279094
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Entry
108279094 CDS
T04658
Name
(RefSeq) clustered mitochondria protein homolog
KO
K03255
protein TIF31
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ipu03012
]
108279094
Translation factors [BR:
ipu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108279094
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
CLU_N
TPR_10
TPR_NPHP3
GSKIP_dom
TPR_MalT
TPR_2
TPR_8
TPR_1
Motif
Other DBs
NCBI-GeneID:
108279094
NCBI-ProteinID:
XP_017348549
Ensembl:
ENSIPUG00000008309
UniProt:
A0A2D0T0V4
LinkDB
All DBs
Position
18:complement(23272477..23289974)
Genome browser
AA seq
1676 aa
AA seq
DB search
MGNLLQCCLRRLFRCKDIPDQIEEQSPLLSRENSDVESLSPSRSDMLASPVLDQDHLIYP
DIVLSSSHRANLDRADLSQQLELVLPESGQNKKQSSVKEECQEGFEEEGMPSTRISQQEF
CYLDRNQLCSTEKEWPLLSSLHSWPSEQSNAANFASQTMIYTHGQGSRYWQASPCQGVQL
LAQGNGSQRLIFSEPKSAGTFSTPSSDSLGKISTQTETIVQVDEVGIQDEYKEETQLGEG
TEQMELNVVRRDQNVARLGQEVTQRPKHEQSAVCSDESAAQLDEVGVKINLDVSNQMEQC
PVQSGQIEAQYRPSIAQTDEIRHETDVLISQNGEHKEPGLRVRLKTSPDIERNQDEITQT
QQLVLELDSIQTEAKTSGHKEQHISGNEPEFAPNKQGAVELRSLNKGQEREKSEELEQDE
IHPNLDQGPEQNERFTLFVVDKLFLATPNIAGPRPNNILSDQTEVSELNRYSDKELQADP
DSVDADPSEDIGLTIRIQVPGTEPTDFQASPLAMVQEIKQVLMDREETCHRTCFSLQLDG
HTLDNFTDLKSITGLQEGSLLKIVEEPYTVREVRLHLRHIRDLLKSLDPTDAYNGIEGSS
LSFLRFFTEERVEENSKFKKRGEELKQFNCSPPEYILPGTKECLLGPLQPQSENLKPIEC
LKVLMTSNWNPPPGSRKIHGDLMYLNVLTMEDRQFSITASTRGFYLNQSTTYSFNPKPEN
PSMLSHSLVELLSQISPVFKKNFSLLLKRRTSTHPFERIGTPLQVFSWTAPALNHAMDCV
RAEDASSSQLGYEGHVPGQVCDWNEELQSTRELPRQSLKDRLLRDRAIFKANSDFVSTAT
RGAMAVVDGNVMPINPSEEPRNHMYVWNNIFFSLGLDGHEHYEELGGEAAAYAASAIDLN
GVRAYSAVDADGLYVLGTVLVDYRGYRITAQSIIPGILERGQEQSVIYGSTDFGKTVVSN
ERFLMLLDKPSKHLRVQRHLVLNKDDSAVELCSSVECKGIMGNDGRHYILDLLFTFPPDL
NFLPVEGEELHTECQQLGFPLQHPHRLVCLRQELIEAFVKYRYHSCKSTASQGLDQESNS
IGSPHSPEAAALRLTADISNKGVDIPTPDKNNSPSQTSSFDIRFNPDIFSPGVRFPKECM
QDIQEQKQLLKDAAAFLVSNQIPDLIKSCVDHTTMPMDGFTLTEALHQHGINVRYLGTVL
EFIEKSPQKTKLDHVYRIALCELITRCTKHMFRTYLVAVESSSLSVSVSHFLNCFLSSPP
DVLGTQQMDRLSSKRRSRRRRSRGSVSGEITSVGASWASLTSSELWRTIQAEAREYYHYR
LPCDSIEQAVDKCGLQRITLLREISIKTGIQLLIREYQFDVKHRPVFTEEDILNIFPIVK
HVIPKANDGIYLLHCGQASIQQGSLKEGCELISQALGLFTNVYGALHQDVCVCLRLLGRI
YYILGDYAEALSHQQKAVLISERVLGIDHPNTILEYKHLGLYCFAGGQTSTALRLLYRAR
YLMLLLCGEDHPEMALLDSKIGLMLHGVMQCDLALKFLENALALTSKYQGPTSLKVAQGH
HLLAKVYESKGEFRSALRHEKERYMIYRNQVGEAHEKTQESSEYLKHLTNQAVILQKTMN
MIYKNRSASSITPLTLATPSRLWIVEQLNLVTGIVLIPLSNKDLETLRDNTQKTSA
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacctgcttcaatgctgtctcagacgtttgttccggtgtaaggacattcctgac
caaatcgaagagcaatctccgctcttgtcgagagagaacagtgatgttgaaagtctctct
ccatcaaggtctgacatgctggcatctcctgttttggatcaggaccacctcatttaccct
gacatagtccttagcagtagtcatcgagctaacctggacagagctgacttatcacagcag
ttagagcttgttttaccagagagtggacaaaacaaaaaacaaagtagcgtcaaggaggaa
tgtcaggaaggtttcgaagaagagggaatgccaagtacaagaatcagtcaacaggaattc
tgctatttggacagaaatcagctatgcagcactgagaaagaatggccgttactgtcttcc
ttacactcatggccatcggaacaatcaaatgccgcaaattttgcttctcagaccatgatc
tacacacatggacaaggaagcaggtattggcaggcatccccgtgtcaaggagtgcagtta
ttagcacagggaaatggaagccaaagactcattttctcagagcccaaatctgctggtacc
ttcagcacaccttcatctgacagccttggaaaaatatcaacacagactgagactatcgtt
caagtagatgaagttgggattcaagatgagtacaaagaagaaactcaactaggagaagga
acagaacaaatggagctaaacgtggtacgccgagaccagaatgtagcacgactgggacag
gaagttacacagagaccaaaacatgagcaaagtgcggtatgttcagatgaaagtgcagca
cagctagatgaagttggagtcaaaattaaccttgacgtaagcaaccaaatggaacagtgt
ccagttcagtccggacaaattgaagcacaatacagaccgagcatagcgcagacggatgaa
ataaggcatgaaactgatgttctaattagtcaaaatggagaacacaaagaaccaggctta
cgggttagactaaagacgagcccagatatcgaaagaaaccaagatgagatcacacagacc
caacaacttgtgctggaactggactccattcagacagaagctaagacttcaggacataaa
gaacagcacatatctgggaatgaacctgagtttgcaccaaacaagcaaggtgcagtagag
ttaagatctcttaataaaggacaagaaagggagaagtccgaagagctggagcaggacgaa
atacatccaaatctggaccaaggaccagagcagaacgaaaggtttacgctgttcgtagtt
gataaactgttcctggccacaccaaatatcgcaggaccacgtccaaataatatcctcagt
gaccaaacagaggtttcagagctaaacaggtatagtgacaaagaactccaagcagatcct
gattctgtagatgcagacccctctgaggacatcgggttgacaatcaggatccaggtccct
ggtactgaacccactgacttccaggcatcaccattagcaatggtgcaggaaatcaagcaa
gtgttaatggaccgtgaggagacctgtcatcgtacctgtttctccctgcagttagatgga
catacactggataacttcactgatctgaaatccatcactggtctacaagagggctcactt
ttgaagatagtggaagagccatacacggttcgagaagttcgtttacaccttcgccacatc
agagacctgctaaagagcttggaccccacagatgcctacaacggcatagagggaagctct
ctgtccttccttaggttcttcactgaagaacgtgttgaagagaacagcaaattcaagaaa
agaggtgaagaattgaagcaattcaactgtagccctcctgagtacattcttccagggacg
aaagaatgtttactgggacccctgcagcctcaaagtgagaatttgaagcccatcgaatgc
ctgaaggtgctgatgaccagtaactggaaccctcctccaggaagcagaaaaatacatggt
gatctcatgtacctgaatgtacttaccatggaggacagacagttcagcattacagcatca
acgcgagggttttacctgaatcagtctacgacttacagctttaacccaaagccagaaaat
cccagtatgcttagtcattctttagtggagctcctgagtcagatcagtcccgtttttaaa
aagaacttcagtcttttactcaagagaagaacatcaacgcatccctttgagaggataggt
actccgttgcaggtgtttagctggactgctccagctctcaaccatgccatggactgtgtt
cgagctgaagatgccagctcttcgcaactgggctatgaaggacacgtgcctggacaggtt
tgtgactggaacgaggagcttcagagcaccagagagctaccacgtcagagcctcaaagat
cgtctgctgagagacagagcaatctttaaggctaacagtgactttgtgagcactgctaca
cgtggtgcgatggccgtggtcgatggcaatgtgatgcccatcaaccctagtgaagaacca
cgcaatcacatgtacgtctggaacaatatcttcttcagcttgggcttagatggacatgaa
cactatgaggagctgggtggtgaggctgcggcctatgccgcctcagccattgacctgaat
ggtgtgagagcatacagtgcagtggatgcagacggcctgtatgtgctcggtaccgtactg
gtggattatcgaggttatcgcatcactgcccagtcgattatcccgggaattctcgagcgt
ggccaggagcagagtgtgatctatggttccactgactttggaaagactgttgtctctaat
gaacggttcctgatgctcctggacaaacccagcaagcatctgagagtgcagcggcacctt
gtgcttaacaaagacgactccgctgtagagttgtgttcctctgtggaatgcaagggcatc
atgggtaacgatggccgtcactacattctggacctgctgttcacatttccacctgacctc
aacttcctgcctgtggaaggcgaggagctccacaccgagtgtcagcagctcgggttccca
cttcaacaccctcatcgcctggtctgtctgagacaagagctaatcgaggcatttgtgaag
tatagatatcactcatgtaagagcacggcatctcaaggcttggatcaagaaagcaacagc
atcggatctcctcacagcccagaggcagctgctttgcgactaacggcggatatttccaac
aagggtgtagatattcccacccctgacaagaacaattctccctctcagacgtcctctttt
gatattcgtttcaaccctgacattttctcaccaggtgtacgttttccgaaggaatgtatg
caggatatccaggaacaaaaacaacttttaaaggatgctgcagccttcctcgtctccaac
caaattcccgacttaattaagagctgtgtcgatcataccacaatgccaatggatggtttt
accttaactgaggccctccatcaacatggcatcaatgtccggtacctgggcacggtactg
gagtttattgagaagagtcctcagaagactaaactggaccatgtttatagaattgcacta
tgtgagctgatcactagatgtacaaaacatatgttcaggacatatttagtagctgtggag
tcatcttccctctctgtctcagtcagccatttcctcaactgcttcctcagctccccacct
gatgttctggggacccagcagatggacagactgtcatccaagcgcaggagtcggcggagg
cggagccggggctctgtgagcggcgaaatcacatctgtgggagcgtcatgggccagcctg
acctccagtgaactctggagaactatccaggctgaggctcgggagtattatcactaccgc
ctgccatgtgacagtatagagcaggcagtggacaaatgtggcttacaaagaatcaccttg
ctcagagagatctccatcaaaactggcatccagcttcttatcagagagtatcagtttgat
gtcaagcacagaccggtgttcaccgaagaggacatcctgaacatcttccccatagtaaag
cacgtcatcccaaaggctaacgatgggatttatcttctgcactgtggccaggccagcatc
cagcaaggaagcctgaaagaaggctgtgagctaatcagccaggccttgggcctgttcact
aatgtttatggggctctgcaccaggatgtctgcgtctgtctgcgcctgctgggacgcatt
tactacatactcggagactatgctgaggcactgagtcaccagcagaaagctgtactgatc
agtgagagagttctgggaatagaccatccgaatactatactggaatataaacatcttggt
ctttattgctttgctggtgggcagacatccacagcactgcgactgctctaccgtgcccgc
tacctcatgctgctgctgtgtggagaagatcacccagaaatggctctactggatagtaag
attggtctcatgttacatggtgtgatgcagtgtgatctcgcacttaagtttctggagaac
gccctggccttgacctccaaatatcaggggcctacctcgcttaaagtggcacaaggacat
cacttgttggcaaaggtgtacgagagcaaaggggaattccgctcggcgctgagacacgag
aaggagcgctacatgatttaccggaaccaggttggagaagcacatgaaaagacacaagag
agctctgagtacctgaagcacctcacgaatcaggctgtaattctgcagaagactatgaac
atgatatacaaaaaccgttctgcatccagtattactcctctcactctcgccacaccgagt
cggctctggattgtggagcagctaaatctggttactggcattgtccttatcccactcagc
aacaaggatcttgaaactcttagggataacacccaaaaaacatctgcttaa
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