KEGG   Ictalurus punctatus (channel catfish): 108279096
Entry
108279096         CDS       T04658                                 
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108279096
Membrane trafficking [BR:ipu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    108279096
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    108279096
SSDB
Motif
Pfam: LLGL Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_HPS5 ANAPC4_WD40 WD40 WD40_Prp19 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Lgl_C Beta-prop_VPS8 Synaptobrevin WD40_like CFAP43_N Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 108279096
NCBI-ProteinID: XP_053543665
UniProt: A0A9F7REN1
LinkDB
Position
2:10878256..10956527
AA seq 1137 aa
MKKFNIRKVLDGLTASPSTSPHAGAKENDFILPETLQSEHFQLCKTVRHGFPYQPSSMAF
DAVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADDSIHLW
NLRQKRPAVLHSLKFNRERITFCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYTIMWNK
AIELSSKAHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKSKKADYRYTYDEAIHSVAW
HHEGKQFICSHSDGTLTIWNIKSPAKPAQTITPHGKQPKDGKKPEPCKPILKVEYKTTRA
GDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYAV
VVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYVADCPVDLIPALYSVGSRQKR
QGYSKKEWPISGGNWGQGTQSYPEIIITGHADGSVKFWDASAIMLQVLYKLKTAKVFEKA
RGKEEKAHTEIVDEDPFAIQLMAWCPDSRMLCVAGVSAHVIIYRFSKQEVTTEVIQLLEV
RLQYEMNDLESPEGDQTPATPTPNTSPSPQSTAPHTHPTSSSNSSDGVRDNVPCLKVRSS
PLKQSPGYQVELVVQLVWVSGEPPQQISSLAINSSYGLVVFGNTNGLVVVDYLQKTVLLN
LSTVELYGSSDPYQRQLRSPRKSRQLSGGLCDINEGSATSEDRCKSPTSVLASNHQQFYN
GGGRGARMSRKLSLPTELKPDLVLLSVCPPRGSIPLDNRDNSFSRSRSSSVTSIDKEARE
AITSFYFFQTYTRKMDSTLSPALWVGTSLGTVLAISLNMPPPGEQRLLQPVIVSPSGTFI
RLKGSIIRMAFLDGSGSLLPPASELWYEPNADSEEKERVRRRRPVSVSPSTSQDLNESQF
MVVCSEKQAKVISLPSQTCIFKHNITETSFVLRADVVQAGPGICVACFCANGHIMTLSLP
GLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYSQDVCENLQEMLGELF
TPVETPEAPNRGFFKGLFGGGAQSLDREELFGESGAGKASRSLAQHIPGPGGIEGMKGAA
AGIVGDLARARIALDERGHKLSEVEERTAAMMASADSFTKHAHEMMLKCKDKKWYQF
NT seq 3414 nt   +upstreamnt  +downstreamnt
atgaagaagtttaatatccggaaggtgctggacggcttgacggcatctccctcgacgtcg
ccgcacgcaggggccaaagagaacgacttcatcctcccggagaccctccagtccgagcac
ttccagctctgcaagactgtccgccatggatttccctatcagccatcttccatggccttc
gacgcagtccagaaaatactcgccatcgggactcagagtggagcattacggttattcggt
cgccccggcgtggaatgttactgtcagcatgagagcggagcagccgtcatccagctacaa
ttcctcatcaacgaaggggcgttagtgagcgctttagctgacgacagcattcacttatgg
aacctgcgtcagaagagaccagccgtgctgcactcccttaagttcaacagggagaggata
acgttctgtcacctgcctttccagagtaagtggttgtacatcggtacagaacgaggaaac
atccacattgtaaacgtggagtccttcaccctctcaggatacaccatcatgtggaacaaa
gccattgaactgtcctccaaggcccaccctggtcctgtcgtccacataagtgataaccca
atggatgaaggcaagctcataataggcttcgagtctggcattgtggtgctgtgggatttg
aagtcaaagaaggcagactaccgctatacttatgatgaggcgatccattctgtggcctgg
caccatgaggggaagcagttcatctgtagtcactcagacggcactctgaccatatggaat
ataaagtccccagccaagcctgcacagacaatcaccccacacggaaaacagcccaaggat
ggaaagaagccagagccatgtaaaccaattctcaaagtagagtacaagacaacaagggca
ggcgatccgtttatgatcctgtccggcggtctatcgtacgacacggttggtcggcggcca
tgtttgactgttatgcatgggaagagcacagcggtgctggagatggactatcctatcgta
gacttcctcacactctgtgaaacgccatatcctaacgattttcaggaaccttatgctgta
gtggtccttctagaaaaggatttagtcgttattgacctcgcacaaaatggttaccctatc
tttgagaacccctaccccttgacgattcatgagtctccggtgacgtgctgcgaatacgtc
gccgactgtcccgtagacctcatccctgcactttattcggtcggctctcggcaaaaacga
cagggctacagcaaaaaggaatggcctataagtggtggaaactggggccagggcactcag
agctatccagaaataataataactgggcatgctgatggttcggtgaagttctgggatgcc
tctgcaataatgctccaggtgttgtacaagctgaagacggccaaggtgttcgagaaagcg
cgcggcaaggaggagaaggcgcatacggagatcgtggacgaggatccgttcgccattcag
ctcatggcgtggtgtcctgacagccgcatgctgtgcgtcgctggagtgtccgctcacgtc
atcatctacagattcagcaaacaggaggtcaccactgaggtcatacagttactggaggtc
cgattgcagtacgagatgaatgatctcgagtcaccggaaggggaccagacaccagctact
cccactccaaacacctcaccaagtccgcagagcaccgccccgcacacgcatcccaccagc
agcagcaactcgtctgatggcgttagagataatgtgccctgtctcaaggtgcgcagcagt
cctctgaaacagtctcccggatatcaggtggagttggtcgttcagttagtctgggtcagt
ggagagccgccgcagcagattagcagcctggcaatcaactcctcatatggcctcgtggtc
ttcggcaatactaacggcctggttgtggtagattacctccagaagaccgttctgttgaat
ttgagcaccgtagagctgtacggatccagcgacccctatcaaagacaactccgatcacct
cgcaagagcaggcagctctccggagggctgtgtgacatcaacgaaggctcagctacgtcc
gaggaccgctgcaaatcccccacctcagtgttggcatctaaccatcagcaattctacaat
ggcggcggtagaggagcaaggatgtcacggaaattaagcttgcctactgagctaaagcca
gacttggtcttactctctgtatgtccaccgcggggttccataccgctagacaacagggac
aactcattcagccgctcgcgcagctcgagcgtgaccagcatcgataaggaagcacgggaa
gccataacgtcgttctacttcttccagacgtacacgcgtaaaatggacagcaccctaagc
cctgccctgtgggtgggaacctctttaggtacggtccttgctatttccctaaacatgccc
cctccaggagagcaacggttactgcagccagtcatcgtctcccccagcggcactttcatt
agactaaaaggaagcatcatccggatggcgttcctggatgggtcaggctcactgctccca
cccgcctcagagttgtggtacgaaccgaacgccgacagtgaggagaaagagagagtgagg
aggaggaggccggtgtccgtctcgccctccacctcgcaagacctgaatgagagccagttc
atggtggtatgctcggagaagcaggccaaagtgatttcactaccctctcaaacctgcatc
ttcaagcacaacatcacagagacatcgtttgtgctccgggcagacgtggtgcaggcgggc
ccaggcatctgtgtggcatgcttctgtgctaatggacacatcatgaccctcagtttgcct
ggactcagaccattgctggatgtaaactaccttccactgacagacatgaggatagccagg
acattctgctttaccaacctgggacaggccatgtacctgacctcccctactgagatccag
aggataacctacagccaggatgtctgcgagaacttgcaggagatgctcggcgagctgttc
actccagtggagacgccagaggcgccaaacagggggttctttaagggcctttttggagga
ggggcacagtcactggatcgagaagaactctttggggagtctggggcaggtaaggcgtcc
cggagccttgcccaacacatccctggaccagggggcattgaaggcatgaagggggcagca
gcgggtattgtgggcgacctggctcgcgcaaggatagcactggatgagagggggcacaaa
ctgagtgaggtggaagagcggacggcagccatgatggccagcgctgactcatttaccaaa
catgcccacgagatgatgctgaagtgtaaggataagaaatggtaccagttctga

DBGET integrated database retrieval system