Ictalurus punctatus (channel catfish): 108279121
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Entry
108279121 CDS
T04658
Name
(RefSeq) collagen and calcium-binding EGF domain-containing protein 1
KO
K19638
collagen and calcium-binding EGF domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
108279121
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GFIT
Motif
Pfam:
Collagen
FXa_inhibition
EGF_CA
cEGF
EGF_LRP2
EGF
Plasmod_Pvs28
EGF_3
hEGF
Motif
Other DBs
NCBI-GeneID:
108279121
NCBI-ProteinID:
XP_017348599
Ensembl:
ENSIPUG00000016569
UniProt:
A0A2D0T109
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Position
18:7993099..8065883
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AA seq
389 aa
AA seq
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MMPPSRFGAVTLLLVFAFISHGSQWTFRQEQEDASREVCSENNIVTTKYPCVKSTGEVTT
CYRKKCCGGFKFVLGQCIPEDYDVCADAPCEQQCTDHFGRVVCTCYPGYRYDRDRHRNRQ
KPYCLDINECNSKNETVCSQICINTPGSYRCDCETGFYLEEDGKTCSKGQRDPLFEKSDN
VMKAGTCSATCEDFHQIKINVFQLKQKMAMLVSNTEVNKQITSEKMLTAHSFLPGPPGQP
GPPGVPGPKGSPGPPGRAGAPGLPGPRGPMGPMGPSPDLTHIKQGRRGPVGPPGAPGRDG
MKGEKGAPGPSGPPGPPGSFDFLLLLMADIRNDIAELQQKVFGKQIPSPAEDFWKDGVDL
GSGEDLKSNGPLRRKRKSPGASADPDWKI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccccgagcagattcggtgccgtcacactgctgctggtgtttgcgttcatctca
cacggatctcagtggacttttcgccaagagcaagaagatgcaagcagagaagtgtgttca
gagaacaacatcgtcaccaccaagtatccgtgtgtgaagtccacaggagaggtgaccaca
tgctacaggaagaaatgctgcggaggatttaagttcgttctgggacagtgtattcctgaa
gattacgacgtgtgcgccgatgccccctgcgagcagcagtgcacggatcatttcggccgt
gtcgtctgcacgtgttaccccggttaccgatacgaccgagatcgccatagaaaccggcag
aaaccctactgcttagatatcaacgagtgcaacagtaaaaacgagacggtttgctctcag
atctgcatcaacactccgggcagctacaggtgcgactgtgagacaggtttctacctggag
gaggacggcaagacatgcagcaaaggccaaagagatcctctcttcgagaagtctgataac
gtgatgaaggcaggaacctgctcagccacgtgtgaagacttccatcagatcaaaattaac
gtttttcagctcaaacagaagatggccatgctggtgagcaacactgaggtcaacaagcag
attaccagtgagaagatgttgacggcacattccttcctgcctggacctccaggacaacct
ggacctcctggagttcctggtcctaaaggttctcctggacccccggggagagctggtgcg
ccaggtctgcctggacctcggggcccgatggggccgatgggtccttctccggacctcacg
cacatcaaacagggccgacgcggaccagtgggtcctcccggtgctccaggcagagatggc
atgaagggggagaaaggggctcctggaccttccggacctccgggacctccaggatccttc
gacttcctcttactgctcatggccgacatccgtaacgacatcgcagagctgcagcagaaa
gttttcggcaagcagattccgtcccctgccgaggatttctggaaggacggcgtggacctc
ggctccggagaggatctcaaatccaacggacctttaagaaggaagcggaaatcgcccggc
gcttctgctgatcctgactggaagatctga
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