Ictalurus punctatus (channel catfish): 108279164
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Entry
108279164 CDS
T04658
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108279164 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
108279164 (rapgef1b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Pacs-1
NAPRTase_C
Motif
Other DBs
NCBI-GeneID:
108279164
NCBI-ProteinID:
XP_053543737
Ensembl:
ENSIPUG00000006801
UniProt:
A0A9F7TRS4
LinkDB
All DBs
Position
18:1866992..1900050
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AA seq
1119 aa
AA seq
DB search
MGNAGGRSQTSSAEADLIWLAKQDKNADSQRSHISTFTMKLMDKFHSPKIKRTPSKKGKQ
SAPEPSVKSTEKPVNKKVSRLEEQEKEVVSALRYFKTIVDKMSVDTKVLQMLPGSASKVL
EAILPLMQVEARIQHSSAVSSCHNRVYQSLANLIRWADQVMLEGIDLDDKETVATVTAVI
KAVLDGVKELVKLTIEKHEQPSPTSPSKPALPVAKAESMCELPLTEREKEILSKTTPTDS
LRNISEEEVAPPKPPLPGLNLAEHRSRMHSCFSPVVTEIPPALPPKKRQSASSPTRIAVV
APMSRTNCGLNLQHGALKQQQQEYEVELLQRRFSGGSQSYGGDSPRLSPCSIMGKLSKSD
EQLSSLERDSGQCSRNTSCETLDNTDGYDPDYDFLHQDLSVSEPLPFPTVPSSSLSPLPE
CLSETPVTSPGPAQPRFSAPVAPLNAVGASNGERPPALPQKKRRSAPILSTCQLYEFRPS
DEDTPTSLVTPTMTNGTELSSPSDSPPPLPEKKSRTILQYMQFVEDYSEPQPSVFYQTPQ
SERIYEQRRNKRFQEVYGSNDSYETPPPPALPPKQRQLASHSSSPSSSSSSSLSLLPPST
GVPEETESSIGLSLSVSNSFLSGHASLTTPTSESANDEGVEGEGEYVNLYSTSQANGDGT
HHSDPLTHCDVIHDSTAHIPLPQEGSKEALVKERLKSTDSSHVKEEVDELSLVDHKEIMS
RITRKAEGDDGPDVRAGSSDILLVHATETDRKDLVLYCEAFLTTYRTFITPEDLIKKLHY
RYTHFCHSPDTFKKRVSKNTFFVLVRVVDELCVVELTEDILRQLMDLVFRLVCNGELSLA
RVLRKNILDKVEQKRLLQHTHVLQPLAARGVSARPGTLHDFRSHEIADQLTLLDAELFYK
IEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKLLLKFIKIMK
HLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALADVE
PPCIPYLGLILQDLTFVHLGNPDLIDGKVNFSKRWQQFNILDSMRRFQQVHYELKRNDDI
VAFFNDFSDHLAEEALWELSLKIKPRNVTRRRTERDEKT
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgcaggtgggagaagccaaacatcgtcggcagaggctgacctgatttggtta
gcaaagcaggacaagaatgcagactctcagaggtctcatatctcgacgttcaccatgaag
ctgatggataagttccactcgcccaagatcaagcgcactccgtccaagaagggcaaacag
agcgctcccgagccgtccgtcaagagcacagagaagcctgttaacaagaaggtgagccga
ctggaggagcaggagaaggaggtggtgagtgcgctgagatactttaagaccatcgtggac
aagatgtcggtggacaccaaagtgctccagatgctgcctggctctgctagcaaagtccta
gaggccattctgcccctcatgcaagtggaggcaaggatccagcacagctctgccgtgtca
tcctgtcataatcgtgtttatcagagtctggcgaatctcattcgctgggccgaccaagtg
atgctggagggcatcgacctagatgacaaagaaacggtggcgaccgttactgcggtgata
aaggccgtgctggatggggtaaaggagttggtaaaactcaccatagaaaaacacgagcag
ccatccccgacgtcgcctagcaagccagcgctccctgtggccaaagcagagagcatgtgt
gaactgcccctgactgagcgggaaaaggagatcctcagcaagaccacgcccacggatagc
ttgaggaacatctcagaagaggaagtagcgccgcccaaacctcctctaccagggttgaat
ttagcagagcacaggagcaggatgcactcgtgcttcagtcctgtggtgacggaaatccca
cctgctctgcctccaaagaagcgccagtccgcctcctcgcccacccgcatagccgtggta
gcgcccatgagtagaacgaactgtggcctcaacctgcagcatggagctctcaaacagcag
cagcaggagtacgaggtagaactactacagaggcgcttctccggcggcagccaatcgtac
ggcggggattcacctcgcctctcgccctgcagcattatggggaaactgagcaaatcagac
gagcagctttcctcactggagagggacagcggccaatgctcacgcaacactagctgtgag
acactcgataacacagacggatacgaccctgactacgacttcctccatcaggacctctcg
gtgtccgagccgttgccatttcccacggttcccagcagctctctgagcccgctcccagaa
tgcctcagtgagacccccgtgacttctcctggcccagcacaaccccgcttcagtgcccct
gtagccccactcaatgccgtgggagcatccaacggagaacgaccccctgcacttccacag
aaaaagaggcgctccgctcccatcctgtcaacctgccagctctacgaattccgtccctct
gatgaagacacgcccacttcgttggtcacacccactatgaccaacggcactgaactgtca
tccccgagcgacagccctccacctctgccggaaaagaagagcagaacgatcctccagtat
atgcagtttgtggaggattactcagaaccacagccatccgtcttctatcagactcctcag
agcgagagaatctacgaacaacgcagaaacaaacggttccaagaagtttatgggtccaat
gacagctatgagactccgccccctccggccttgccacccaaacagcggcagctggcatct
cactcttcctctccctcctcctcttcctcctcctctctttcgctcctccctccctccact
ggtgttccagaggagacggagtcttctattggcctcagcctgtctgtgtctaactccttc
cttagtggccacgcctctttaaccacacccacgagtgagagtgcaaacgatgaaggtgta
gaaggagaaggagagtatgtgaacctgtactctacctcacaggctaatggagatggcaca
caccactcggacccactcacacactgtgatgtaattcacgactccactgcgcacatacca
ctgccacaggaaggaagcaaggaagcgttagtcaaagagaggttgaagtcgacagactcg
agtcacgtcaaagaggaggtcgatgagctttctctcgtcgatcacaaagagatcatgagt
cgcatcactcgtaaagctgagggggatgatggccctgacgtccgagcaggctcaagcgat
attctcttagttcatgctacagagaccgatcgcaaagatctggtgttgtactgtgaagct
tttctaactacatacagaaccttcatcactcctgaagacctcatcaaaaaactacattac
agatatactcatttctgccatagtccggacacgtttaagaagcgcgtcagtaagaacact
ttcttcgtgctggtgcgggtggtggacgaactctgcgtggtggagctgacggaggacatc
ctcaggcagctgatggacctcgtgttccgactggtatgtaacggcgagctgagtctggct
cgcgtgcttcgcaaaaacatcctggataaagtggaacagaagaggctgctgcagcacaca
cacgtcctccagccgttagcggcacgaggggtctcggccaggccaggcacactgcatgac
tttcgcagccatgagatcgctgatcagctcacacttctggatgcagagctcttctacaag
attgagattccagaggttcttttgtgggcgaaggagcagaatgaggagaagagtcccaat
ctgactcagtttacagagcactttaataacatgagctactgggtgcgctcaataatcatc
cagcaggagaaagctcaggaccgggagaaacttctgctcaaattcatcaagatcatgaag
cacttgaggaagttgaacaactttaactcgtacctggcaatcctgtcggctttggactcc
gccccaatcaggaggcttgagtggcagaagcagacatctgaggggttggaggagtactgc
accttgattgacagctcatcgtcttttcgagcttatagagcggcattggctgacgtggag
cctccctgcatcccttacctcgggttgatcctgcaggacctgaccttcgtacatctggga
aatccggacctgattgatgggaaagtcaacttctctaagcgctggcagcagttcaacatc
ctggacagcatgaggcgcttccaacaagtccactacgagctgaagaggaacgacgacatc
gtggcgttcttcaacgactttagcgaccacctggccgaggaggcgctgtgggagctttcg
ctgaagatcaaaccacgcaacgtcacacggcggcggactgagcgtgacgagaaaacctag
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