Ictalurus punctatus (channel catfish): 108279165
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Entry
108279165 CDS
T04658
Symbol
pecam1a
Name
(RefSeq) platelet endothelial cell adhesion molecule
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04148
Efferocytosis
ipu04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108279165 (pecam1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108279165 (pecam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ipu04090
]
108279165 (pecam1a)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108279165 (pecam1a)
04091 Lectins [BR:
ipu04091
]
108279165 (pecam1a)
CD molecules [BR:
ipu04090
]
Proteins
108279165 (pecam1a)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
108279165 (pecam1a)
Lectins [BR:
ipu04091
]
I-type lectins (Siglecs)
108279165 (pecam1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_C17orf99
V-set
Ig_C19orf38
VEGFR1-3_N_Ig-like
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
108279165
NCBI-ProteinID:
XP_017348679
Ensembl:
ENSIPUG00000009525
UniProt:
A0A2D0T186
LinkDB
All DBs
Position
2:24731375..24744004
Genome browser
AA seq
745 aa
AA seq
DB search
MMERWPFWPTLVFTCFLMLWHDGEAEAAFTIDWVKLTLLPGTTVERGSKLTLRCEVKVSH
SSSQLMHTLKFLMDGRVIYSKNTSEAMVEYSLVPARASDSGLYDCQVQIFKKEKISEKQR
LTVTGLQTPQLKVQPNIVTEGDEVMATCSAPEEIGGLHVYFYKNNQDLQIIYSKDNSATI
NINFQESGNISLHCNYILMLHPTAGRSNNSNTVSIFLQELEITPSIRILPNAVVVEGDRV
HIICNVSDYSQSGLEVFLTKDTVLHKDHRTFSHSFVVTANDSGEYVCKTEKGNVQKISKA
QLQVAELFSRPTLSMTPEYVFEGQHFNLSCRSFNISQTQITAKVKYSLYKDNNRLIDGHV
FNTTASTANSGNYYCKAAAEGITKVSMPLVINVKVPVSAPVFRTVGKIIIGQPFQLLCES
EHGTLPITYTLLKFQKPVAHMTVTGPQRSALFNISSISHRNESHSFTCMAEMQGSHYSKY
SPSLNTPVIETVSGPELTLKTKGYVVTEGVDLILYCSVQQGTVPITFSWYRNGVVKPLNS
TRISKTQGFHIIKSITRDDEGQYYCQAYNDANEPKKSRQVHIEVNLAGWKKILSGVSCIF
LLVLIVIILVIFLKKAHTPRKRKRAVELSVKPARPKSEDPMRVSLTLDFEDNTAGNATPG
IMGRNVWHDHVSSSESDEECKKEESEKSQNVDEPSLQNVDSGGELVMHDTETVKDDFLEM
KQDEAPHVDIGLEYVQLNNCELKPE
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcgctggccattctggcccactctggtcttcacctgttttttaatgctgtgg
catgatggtgaggcagaggcagcattcaccattgactgggtgaagctgacccttcttcca
ggaaccacagtggagagaggcagcaaactgaccctccgctgtgaagtcaaggtcagccac
agttcctcacaactcatgcacactctgaagttcctgatggatgggagagtgatctactcg
aaaaacaccagtgaagctatggtggagtacagcctagtcccagccagggcttccgactca
ggcctttacgattgccaagtccaaatcttcaaaaaggagaagatcagcgagaaacagaga
ctcactgtaacaggcctgcagaccccacagctaaaagtacagcccaacattgtgactgag
ggtgatgaagttatggccacatgcagtgcaccagaggagatcggtggtctgcatgtctac
ttctacaaaaacaaccaagatctccagattatttatagcaaagacaattcagcaaccatt
aacataaattttcaagaatcaggaaacatctcccttcactgtaactacatacttatgctg
catcccactgcaggtcggtccaacaacagcaacactgtgagcatctttttgcaagaactt
gagataacaccgtcaataagaattcttcctaatgcagttgttgtggagggggaccgagtg
cacataatctgcaatgtttcagattactcccaaagtggccttgaagttttcctgaccaaa
gacactgtgttacataaagaccatcggacattcagtcacagctttgtggtaacagcaaat
gactctggagaatatgtatgtaaaactgaaaagggcaatgttcagaagatctccaaggcc
cagctacaggtagcagagttgttttcaagacctactctaagcatgactccagagtatgtg
tttgagggacaacacttcaacctgagctgtaggagttttaatatctcgcaaacacaaatc
actgccaaagtgaagtacagtctgtacaaagacaataaccgtctaattgacggacatgtc
ttcaacactacagcaagcacagccaacagtggaaattactactgtaaggctgcagctgag
ggcatcaccaaagtgagcatgccattggttattaatgttaaagtgcctgtttcagctccg
gtctttcgcacagttggaaagattatcatagggcagccgtttcagctcctttgtgagagt
gaacatggaacgctccctatcacctacaccttactaaagttccagaagccagtggcacac
atgacagtgactggtcctcagcgtagtgctttattcaacatctcctccatcagtcacaga
aatgagagccacagcttcacctgcatggctgagatgcaggggtctcactacagcaaatat
agtccatctctcaacacaccagtcatagaaactgtgtctggaccagaattgactcttaaa
actaagggctatgtggtcaccgaaggtgtggatctcattctctactgtagtgtgcagcaa
ggaacagttcccatcaccttcagctggtaccgcaatggagttgtgaagccactgaacagc
acacgaattagcaaaacacaaggatttcacatcatcaagtccataactcgtgatgacgaa
gggcaatactactgccaggcctacaatgatgctaatgagccaaagaagagtcgtcaagtc
cacatcgaagtgaacttagcaggctggaagaagattctcagtggtgtgtcctgtatcttt
cttttggtgcttattgtcatcatccttgtcattttcctcaagaaagcacatactccacgg
aaaagaaaaagagcagttgaattatctgtaaagcctgcacgtcctaaatccgaagatccc
atgagggtgagtctgactctcgactttgaggacaatactgcaggcaacgccactcctggt
atcatgggccggaatgtgtggcatgatcatgtatcaagctcagaatctgatgaagagtgc
aagaaggaagagtctgagaagtctcaaaacgttgacgagccatcccttcagaatgtggac
tctggaggagagcttgttatgcatgatacagaaaccgtgaaagatgatttcctggaaatg
aaacaagatgaagcgccccatgtggatattggtctggagtatgttcaacttaacaactgt
gaactgaaacctgagtag
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