Ictalurus punctatus (channel catfish): 108279208
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Entry
108279208 CDS
T04658
Symbol
plrdgb
Name
(RefSeq) PITP-less RdgB-like protein isoform X1
KO
K24069
membrane-associated phosphatidylinositol transfer protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108279208 (plrdgb)
Membrane trafficking [BR:
ipu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108279208 (plrdgb)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LNS2_PITM1-3
PITM1-3
DDHD
Acid_phosphat_B
Motif
Other DBs
NCBI-GeneID:
108279208
NCBI-ProteinID:
XP_017348748
Ensembl:
ENSIPUG00000009808
UniProt:
A0A2D0T1E7
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Position
18:complement(23722364..23784770)
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AA seq
951 aa
AA seq
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MAKETREKDASRKFSASHWRLQNIVQESMDSSDEEFFDARALKTRVSHRAWSRSCRSAHV
MEGKTAILLEMSQWNSNDLVEQIETLGHLERSRESLYRLRHPRCAPQSSVDGLEDMERKC
RTQLLILVVHGGHILDSGGGDAGGKAGDAATLASVLERVARAHFQEAADSMLVRLVPCPP
VCAEAFSLVSHLNPYSYDESCVCSSVDHLPLAALPILAIAAPQYQDAVAVVIAQANRVYH
DFLQSPEGLGFTGQVCLVADCVGGVLCFDALCFSGDKRHGSPTTNTTNYSTESLKEKPGM
MSSLSPTLRSSKRLSKSNIDVSALCQSAPALYRPLIRKQSDSCDTDIAGSQREVFFSSLS
QDEQINSAQAQYPGCFDFEVSDCFLLGCPLGLVLAMRRTVLPAVQIAQLRPACSQIFNLF
YPSDPSASRLEPLLYPPLTQLPPFTVSRYQRYPLGDGRSTLIADTVVKQPLEGSAEIVPS
ACCKTASDGTSSDAGAKDSQPERTISQLCSRWWGFKRLDYVLYCPDVLTAFPTVALPHLF
HASYWESTDAVAFILRQVLRCDCLKAGEADCCDSMPISPSSPREKWLRRRTHVKLRNVTA
NHRVHDVIATEDGPQTLVGRFMYGPLDMVTLTGEKVDVFLATQPGSGRWVLFDTEVTTSS
GRITYTIPKNKRLSVGVYPIKMVVKGDQTSAEAFLTVLPRGMECVVFSIDGSFAASVSLM
GSDPKVRPGAVDVVRHWQDLGYLIIYITGRPDMQKQRVVSWLSQHNFPQGMVFFSEGLVH
DPLRQKTIFLRGLIKECHIKIGAAYGSMKDMSVYSALSLEASQIYIVGRPSKKHQHQCQF
LSEGYAAHLSALEFEHGSRPKKNRMILRQGSFGISSKPDFLSPSPDFLTCKRTPLLRRAM
SMQQASPPSSSSSTPKPERAQSQPESHRDGPEIRIELDDEDPEAGGFTAVL
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagagacacgagagaaagatgcatcgcggaaatttagcgcgtcccactggagg
ctgcagaacatcgtacaggagtccatggacagctcggacgaggagttcttcgatgcccga
gcactcaagacccgagtgtctcaccgcgcgtggtcgcgcagctgtcggagtgcacatgtt
atggaggggaagacagccatcctgctggagatgagccagtggaactcgaacgatctggtg
gagcaaattgagaccctgggacacctggagcgctcacgagaaagcctgtacagactgaga
caccctcgttgtgcaccacagagcagtgtagatggtctggaggacatggagaggaaatgc
cgaacgcagctgttgatcctggttgttcacggaggtcacattctagactctggaggtggt
gacgcaggtgggaaggcaggagacgccgcgacgctggcgtcggtgctggagcgggtggca
cgcgctcactttcaggaagcagcggacagtatgctagtgcgcttggtgccctgccctccc
gtgtgtgctgaagccttttcgctcgtctctcacttgaatccgtacagctacgacgagagc
tgcgtttgcagtagtgtggatcacctgccgttggccgctctgcccatcctcgccatcgcc
gctcctcagtaccaggacgccgtggccgtggtgatcgctcaggccaatcgggtgtatcac
gacttcctccagtcacctgaggggctgggcttcactgggcaggtttgcttggtggctgac
tgtgttggcggagtgctgtgtttcgacgcactgtgttttagtggtgacaagcggcacgga
agtcccacgacgaacactacaaactacagcactgagagcctcaaggagaagccaggaatg
atgagcagtctgagtcccacgctgaggagcagcaagcgcttaagtaagagcaacatcgac
gtttcagcactatgccagtcagcgccagccctctaccgtccactcattcgcaagcagagc
gactcgtgtgacacggacattgctgggagtcagagagaggtcttcttcagcagtctgtct
caggatgagcagataaactccgcacaggctcagtacccaggctgcttcgactttgaggtt
tcagactgctttctgctgggctgcccactgggactggtgctcgccatgaggagaaccgtg
ctgccggctgttcagattgcccagttgcgtccagcctgctcgcaaatcttcaatctattc
tacccgtctgacccgtctgcctcacgtctggagcccctgctgtacccgcctctcacccag
ctgccccccttcactgtgtcacgctaccagcgctacccattgggcgacgggcgctccact
ctcatagccgacaccgtggttaaacagccgctggaaggaagcgctgaaatcgttccgtct
gcgtgctgcaagacggcgagtgatggaacatcttccgacgccggggccaaggacagtcag
ccagagcgtaccatctcacagctatgtagcaggtggtggggttttaagcggctggactat
gtgctctactgccccgacgtgctcaccgcgttccccaccgtagcgctgcctcatctgttc
cacgcttcatactgggagtctacagacgctgtggccttcatcctcagacaggtgctgcgc
tgtgactgtttgaaggcaggtgaagcagactgctgcgactcgatgcccatctccccgtcc
agccctcgagagaagtggctccgcagaagaacacacgtcaaactgcggaacgtgacggct
aaccacagagtacacgatgtgatcgcgacagaggacgggcctcagacgctggtgggaagg
ttcatgtacggccctctggacatggtcaccctgacgggagagaaggtggatgtgtttttg
gcgacgcagcccggatcaggacgctgggtgctgttcgacaccgaggtaaccaccagcagc
ggtcgcatcacctacaccattcccaaaaacaagcgactctcggttggcgtctaccccatc
aaaatggtggtcaaaggcgaccagacgagcgcagaggcattcctcactgtgctgccgcga
ggaatggagtgtgtggtgttcagcatcgacggctccttcgctgccagcgtctcactcatg
ggtagtgaccctaaagtccgccctggagctgtagatgtggttcggcactggcaggacctc
gggtacctgatcatctacatcaccggtcggcccgacatgcagaagcagagggtggtgtcg
tggctctcgcagcacaacttcccccagggcatggtgtttttctccgaggggctcgtccac
gaccccctgcgccagaaaaccatcttcctcaggggcctcatcaaggagtgtcacattaag
atcggcgcggcgtacggctctatgaaggacatgtccgtgtacagcgctctgagcttggag
gcctcgcagatctacatcgtgggaagaccatccaagaaacaccagcaccagtgccagttc
ctgagtgagggttacgctgctcacctctcagctctggagttcgagcacggctcgcgtccc
aagaagaaccgcatgatcctgcgccagggctcgttcggaatctcgtccaaacccgatttc
ctgtctccgtcgcccgatttcttgacgtgtaagcgcacgccgctgctgcgccgagccatg
tccatgcagcaggcgtctccgccctcttcgtcgtcctccacgcccaaaccagagcgcgct
cagagccagcccgagagccacagggacggccccgagatccgcatcgaacttgatgatgag
gatccggaagcaggaggttttacagctgtgctgtga
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