Ictalurus punctatus (channel catfish): 108279241
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Entry
108279241 CDS
T04658
Symbol
nefma
Name
(RefSeq) neurofilament, medium polypeptide a
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108279241 (nefma)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
108279241 (nefma)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
Plasmid_RAQPRD
Motif
Other DBs
NCBI-GeneID:
108279241
NCBI-ProteinID:
XP_017348808
Ensembl:
ENSIPUG00000003572
UniProt:
A0A2D0T1L1
LinkDB
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Position
18:complement(19786596..19791705)
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AA seq
835 aa
AA seq
DB search
MSYSVDVLGSPFRRVMDTRTSYSRSSGGSGSSGFRSQTWSRASPVSAVPYKRTINESMDL
SMDLTTPSSTLNEKEQLQGLNDRFAVYIDKVHFLEEQNKQIEAEINALRRKQVSRTQLSE
EHERELHDLRGAIEQLHSDKARLHLDAERLQDDIQRLRERLEDEARVRADTEAMTRALKK
DAGDSTLAKAELEKKIQALLDEIAFVRGDHEEEVGELLAQLQASQAVTAEKREWQKADIT
DALREIRVQLEGHSNRNLQQVEDWFMCRYSKLTEAAEQNKDAIKSARDEISDYRRQLQAK
TVELEAARGTKESLERQLSDIEERHGSDLASLQETIHQLDNELKSTKWEMARHLREYQDL
LNVKMALDIEIAAYRKLLEGEETHFSTYPYRQTVTKGPKVKAEPPKLRVQHKFVEEIIEE
TRVEDEKLEIEEALAEMAAELSEKKEDEGEEEAEEEAEEKEGEEEEVVASAQAKVSASAP
ADEAEEAETKEGDEEEGDDEGKDDEEGQEEKEEEKGEDAEEGGEGEDEEEAEVEETVLST
KAPESKASPEKEKAEEEGGAGEEEAGEEEVDEKEAETEEKESEKKDEAEKEAEQAKDDKE
TKSDKVESPKAESPKESPKSESPKASSPKSESPKPASPKSESPKATSPKSESPKATSPKS
ESPKATSPKSESPKAPKAEEAKKETPKPESPKSESPKKETATDEPQKKEESKPEIAEKPS
KEEKSEEKKTDKKEDTGKEEKDKKETEKKEPEKKDVISNGVDESPTKDDPSQKVVITKTV
ETITTGEDGAKHVTKSITVTETVKAAEETVEEKVMATKKVEKVSTHSVKEITENE
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgagctactcggtagatgttctcggaagtcccttccggagagtgatggacactaggacg
agctacagccgcagcagcggtggctcgggctccagcggcttccgctcgcagacatggtcc
cgggccagcccggtctcagccgtaccttacaagagaacgatcaacgagagcatggatctg
agcatggacctgaccacgccgtcttcaacgctcaacgagaaagagcagctacagggtctg
aacgaccgcttcgcagtgtacatcgacaaggtgcacttcctggaggagcagaacaagcag
atcgaggcagagatcaacgcgctgcggaggaagcaggtttcccgcacgcagctgagcgag
gagcacgaacgggagctgcacgatctccgcggtgccattgagcagctgcacagcgacaag
gcgcgtctgcatcttgatgccgaacgcctgcaggacgacatccagcgactgcgtgagcgt
ctggaagacgaagcccgtgtgcgcgctgacaccgaagccatgacgcgcgctctgaagaag
gacgccggagactccaccctggccaaagcagaactcgagaagaagatccaggcgctcctg
gacgagatcgcgttcgtccgcggcgaccacgaggaagaggtcggcgagttgctcgcacag
ctccaggcatcgcaagccgttaccgctgagaagagggagtggcagaaggcggacatcacc
gacgctctgcgagagatccgcgtccagctcgagggtcactccaaccgcaatctgcagcag
gtcgaagactggtttatgtgccgctattcaaaactgacggaggccgcggagcagaacaag
gacgccatcaagtccgcccgggacgagatctccgactaccggcgccagctgcaggccaaa
acagtggagctcgaggcggcccgtgggaccaaggagtctctggagaggcaactgagcgac
atcgaggagcgacacggctccgacctagccagtcttcaggaaaccatccaccaactggat
aacgagctgaagagcacgaaatgggagatggcaagacatctgcgcgaataccaagacctg
ctgaatgtcaaaatggccctagatatagagattgcagcatacaggaaactacttgaagga
gaggagacccacttcagcacatacccctatcgccagactgtcaccaaaggccccaaggtc
aaagcagaaccccccaaactgagggtccagcacaagtttgtggaagagatcatcgaggag
actcgggtggaagatgagaaattggagatcgaagaagccttggcagagatggcagcagaa
ctgtctgaaaagaaagaagatgaaggagaggaagaagctgaagaggaggctgaggagaaa
gagggagaagaggaggaggttgtcgcttcagctcaggccaaagtgagtgccagcgctcct
gctgatgaggctgaggaagctgagactaaagaaggtgatgaggaagaaggtgatgatgaa
ggaaaggatgatgaagaaggccaggaagaaaaggaagaagaaaaaggagaagatgcagag
gaaggtggggaaggagaagatgaggaggaagcagaagttgaggaaactgtattgagcacc
aaggcacctgaatcaaaggcctcaccagagaaggaaaaggctgaagaagaaggaggtgct
ggagaagaagaagcaggagaggaagaggttgatgagaaagaagcagaaactgaggagaaa
gaatctgagaaaaaggatgaggctgagaaagaggctgaacaagcaaaagatgataaggag
accaagtctgacaaggttgaatctcctaaagcagaatcgccaaaggagtctcccaagagt
gagtctccaaaggcttcatcaccaaagagtgagagcccaaaacctgcttctccaaagagt
gagagcccaaaagctacttctccaaagagtgagagcccaaaagctacttctccaaagagt
gagagcccaaaagctacttctccaaagagtgagagcccgaaggccccaaaagcagaggaa
gccaagaaagaaactccaaaacctgaatctccaaaaagtgagagtcccaagaaggaaaca
gccacggatgagccacagaagaaagaagagtcaaaacctgaaatagccgaaaaacccagc
aaggaggaaaagtctgaagagaagaagacagataagaaagaagacactggaaaggaagaa
aaagacaaaaaggagacggagaaaaaagagccagagaagaaagatgtgatctcaaatgga
gtggatgaaagccctaccaaggatgatcctagccagaaggtggtcataaccaaaacagtg
gagaccatcaccactggcgaggacggagccaaacatgtcaccaagtccatcacagtcacc
gaaacagtgaaagcagcagaggagacagtggaggagaaagtgatggccaccaagaaagtg
gagaaagtctccacccactctgtgaaggagatcacagaaaacgagtag
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