KEGG   Ictalurus punctatus (channel catfish): 108279313
Entry
108279313         CDS       T04658                                 
Name
(RefSeq) 3'-5' exoribonuclease 1
  KO
K18416  3'-5' exoribonuclease 1 [EC:3.1.-.-]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    108279313
   03036 Chromosome and associated proteins [BR:ipu03036]
    108279313
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     108279313
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    Other RNAi proteins
     108279313
SSDB
Motif
Pfam: RNase_T SAP SAP_new25
Other DBs
NCBI-GeneID: 108279313
NCBI-ProteinID: XP_017348954
Ensembl: ENSIPUG00000004305
UniProt: A0A2D0T214
LinkDB
Position
18:complement(20444514..20451340)
AA seq 333 aa
MEEQSKKVLFKSEMTECGSEQRNSGESKSEQENGSCKETAPADFSDPVYKELSLANGTIN
RMNRDELRAKCAELKLDTRGVKDVLKKRLKNYYKKQKLKQSATAGSDGSYYDYICVVDFE
ATCEENNPRNFIHEIIEFPMVLIDMHTLEIVDSFQEYVKPQLNPKLSDFCVELTGITQKM
VDEADPFPRVLRRVVDWLQEKELGTKYKYTLLTDGSWDMSKFLHTQCRLSRLRYPQFARN
WINIRKSYGNYYKVARTQTRLNCMLENLGMRYEGRPHCGLDDSRNIARVAIRMLKDGCRL
RANERLYEGELQNVSSTVVLEGAPPPQYPKSRD
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggaggaacagagtaaaaaagtcctttttaaatccgaaatgacggaatgtgggagcgag
cagaggaacagcggcgagtctaaatccgaacaggaaaacggctcgtgtaaagaaacggca
cctgcggatttcagtgatccggtgtataaagagctctctctggccaacggcaccattaac
cgcatgaacagagatgaactgcgtgctaaatgtgctgagctcaagctggacaccagaggt
gtgaaagacgtgctgaagaagcgtcttaagaactactataagaagcagaagctgaagcag
tcggcgacggccggctccgacggctcgtattacgactacatctgcgtggtggacttcgag
gcgacgtgtgaagagaataacccgcggaactttatccacgaaatcatcgagttccccatg
gtcctcatcgacatgcacactttggagattgtcgattcgtttcaggaatacgtgaagccc
cagttgaacccgaagctctcggatttctgcgtggagctaacaggaataacacagaaaatg
gtggacgaggcggatccgttccctcgcgttcttcgccgagtggtggactggctgcaggag
aaagagctgggcaccaagtacaaatacactctgctaacagacggatcttgggatatgagt
aaattccttcacacgcaatgccgactgagtcgactccgatatcctcagtttgcaagaaat
tggatcaacatcagaaagtcttatggaaactattataaggtggctcggacccagacgagg
ctgaactgcatgttggagaatctcggcatgcggtacgagggccgaccgcactgcggcctg
gacgactcacgcaacatcgcccgtgtcgccatccgcatgctgaaggacggctgtcggctg
cgcgcgaacgagcgtctgtacgaaggcgagctgcagaacgtgtccagcacagtggtgttg
gaaggagctccgcctcctcagtaccccaaaagcagagactga

DBGET integrated database retrieval system