Ictalurus punctatus (channel catfish): 108279315
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Entry
108279315 CDS
T04658
Name
(RefSeq) cyclin-dependent kinase 9 isoform X1
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108279315
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ipu01001
]
108279315
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108279315
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
108279315
2.7.11.23 [RNA-polymerase]-subunit kinase
108279315
Protein kinases [BR:
ipu01001
]
Serine/threonine kinases: CMGC group
CDK family
108279315
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
108279315
Brd4/P-TEFb complex
108279315
7SK RNP complex
108279315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
Pkinase_fungal
RIO1
Motif
Other DBs
NCBI-GeneID:
108279315
NCBI-ProteinID:
XP_017348958
Ensembl:
ENSIPUG00000021301
UniProt:
W5UIF0
LinkDB
All DBs
Position
18:complement(676396..682507)
Genome browser
AA seq
394 aa
AA seq
DB search
MQRDKTGSSAVSGDKPDRETAIMSKYYDGVEFPFCDEFSKYEKLAKIGQGTFGEVFKAKH
RQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQFNRYKGS
IYLVFDFCEHDLAGLLSNANVKFTLSEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLIT
RDGVLKLADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI
MAEMWTRSPIMQGNTEQHQLTLISQLCGSITAEVWPGVDKKYELYQKMELPKGQKRKVKE
RLKAYVKDPYALDLIDKLLVLDPAQRVDSDDALNHDFFWSDPMPSDLKHMLSTHNTSMFE
YLAPPRRRGHMPQQPANQNRNPATASQSEFDRVF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgagacaagactgggagctcggcggtgtctggcgataagccggaccgggagacc
gccatcatgtccaaatattacgacggcgtcgagtttcctttttgcgacgagttttctaag
tacgaaaagctcgccaagatcggccaaggcaccttcggggaggtgttcaaggccaaacac
agacagactggcaagaaagtagcgctgaagaaggtgctcatggaaaatgagaaagaaggg
tttcccatcacagcactgagggaaatcaagatcctgcagctgctaaagcacgagaacgtc
gtaaatctgatcgagatctgtcgaacaaaagccacccagtttaaccgttacaagggcagc
atatacctggtgtttgatttctgtgagcacgatctggctggcctactaagcaacgccaat
gttaagttcacgctgtcggagattaaaaaggtcatgcagatgctgctgaatggactctac
tacatccacagaaacaagatcctgcacagagacatgaaagcagcaaacgtgctcatcaca
agggatggagtgctgaaactggctgattttggcctggcaagagccttcagcctggcaaag
aacagccagggcaatcgctacaccaaccgagtagtgaccctgtggtaccgacctccagag
ctcctgctgggagagcgtgattacgggccacccatcgatctgtggggtgcagggtgtatc
atggcggaaatgtggacgaggagccccatcatgcagggaaacacagaacagcaccaactc
actctgatcagccagctgtgtggatccattactgcggaagtgtggcccggtgtggataaa
aaatatgagttgtaccagaagatggagttacccaaaggacagaagcgaaaggtaaaagag
cgtctgaaggcgtatgttaaagatccatacgctctggatctgatcgataagctgctggtg
ctggacccagcgcagcgtgtggacagtgacgacgctctcaaccacgacttcttctggtct
gatcccatgccctctgacctcaaacacatgctctccacacacaacacgtccatgtttgaa
tacctggcccccccgcggcgccgtggtcacatgccccaacagccagccaatcagaaccgc
aacccagctacagccagccagtctgagttcgatcgtgttttctga
DBGET
integrated database retrieval system
