Ictalurus punctatus (channel catfish): 108279334
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Entry
108279334 CDS
T04658
Name
(RefSeq) general transcription factor 3C polypeptide 5 isoform X2
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108279334
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
108279334
TFIIIC, fungi type
108279334
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
Pox_Ag35
PTPRCAP
Motif
Other DBs
NCBI-GeneID:
108279334
NCBI-ProteinID:
XP_017349001
Ensembl:
ENSIPUG00000013351
UniProt:
W5U923
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All DBs
Position
18:5969270..5979908
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AA seq
512 aa
AA seq
DB search
MDVKVNTASSDTEAECKSKDAATVPLSETRLVCIEYPGLVNNVDKMLATIGGEQGLSKTY
GDSSKRLELRYRPQDPFCHPVCGNRYSSTNLLIRVRRRTNRRSGESHVIMEILGLIDTTY
KFQGMADFQYLAMHREADGSQISLYDKVILCKPEKKAFFDQSVPLFLPPPIFSRLDNPVD
YYYRPDIVHKEGNAPHLLTKENLIGPNRARRAHNAIFVIFEDKTVPTEPLEAAKVNWQKN
AMHHSDLKAEEEMRKLFERRPIWSRNAVKANINIHPEKLKILLPILAYYMLTGPWRSLWV
RFGYDPRKHTEAKIYQVLDFRIRCGVRHGNSFNDIPVKAKRSAYQYTLPTSVNKAAPQAA
SVKDIAQESSSSTLSSSTKYILKDSVYIFREGMLPPYRQMFYQLCDLDVEKIKSIIHKND
GKEEVCDERDGWCLPRTSDELRNIISSMIAQVARAKRPSLSSPKLRPVRAGRKIEESDED
EDDNDEDDDDDDEDFKPDGSENEMETEMLDYM
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgaaagtaaacacagcctcctcagacacggaggctgagtgtaaaagtaaagac
gccgcaacggtgccgttatcagagaccagactggtttgtattgaatatccgggtttggtt
aataatgtggacaaaatgctggcgaccattggaggggaacaggggctgtccaagacgtat
ggagactcgtccaaacggctggagctgcggtatcgtccccaggaccctttctgtcaccct
gtatgtgggaatcgctattcttccaccaacctgctcatccgagtgcggcgcagaacaaac
agacgcagcggggaatctcacgtcatcatggagatcctgggccttatagacaccacgtat
aaatttcagggaatggcagattttcagtacctggctatgcacagagaggctgacggatcc
cagatctctttgtatgacaaggtcattttgtgcaaacctgaaaagaaggcgttctttgac
cagtctgtgccgctcttccttccacctcccatcttctctcgtctggacaacccggtggat
tactactaccggccagatattgtccacaaggaaggaaacgctccgcatttgctcaccaaa
gagaacctgattggtcctaaccgagcccggagagcccataatgccatatttgtgattttt
gaagataagactgtcccaactgagccactagaggctgctaaggtgaactggcagaaaaac
gctatgcaccacagtgacctcaaggcagaggaggaaatgaggaagctatttgaaagacgg
cccatatggtcccgcaatgccgttaaagccaacatcaacattcacccggagaagctgaag
atcctgctccccattctggcttattacatgttgaccgggccatggagaagcttgtgggtg
aggtttggttatgatccccgtaagcacacggaggccaaaatctaccaggttctggacttc
agaatccgctgtggagtgagacatggaaatagcttcaatgatataccagtaaaggctaaa
agaagtgcctaccagtacactcttccaacctcagtcaacaaggcagcgcctcaggcagct
agtgtgaaggacattgcccaggagagttcatcaagcaccctatcctcttcaacaaaatac
attcttaaggattcggtttatatattccgtgagggaatgttaccaccctaccgacagatg
ttttaccagctgtgcgacctggatgtagagaaaattaaaagcatcatccataaaaatgac
gggaaggaggaagtgtgcgacgagcgtgacggctggtgtttgccacggacttcagacgag
ctcagaaacatcatctcttccatgatcgcgcaggtggcgcgagccaaaagaccttctctg
tcttccccgaagctgaggcctgtccgggccggacgtaaaatcgaagagagtgacgaggat
gaagacgacaacgacgaagacgatgatgacgacgatgaagatttcaagcctgatgggagt
gaaaatgaaatggagacagaaatgcttgattacatgtaa
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