Ictalurus punctatus (channel catfish): 108279337
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Entry
108279337 CDS
T04658
Name
(RefSeq) BUD13 homolog isoform X1
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108279337
Spliceosome [BR:
ipu03041
]
Complex B
Other components
RES complex
108279337
Complex C
108279337
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GFIT
Motif
Pfam:
Bud13
PCF11_RFEG_rpt
Motif
Other DBs
NCBI-GeneID:
108279337
NCBI-ProteinID:
XP_017349006
Ensembl:
ENSIPUG00000001490
UniProt:
A0A2D0T2G9
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Position
18:complement(17866934..17873640)
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AA seq
620 aa
AA seq
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MAASKSVTSASTSISKAEYLKRYLSNDEDGKKSKEKKAKKKRPKLAGRGMKIVDDDIDWR
ELAVNREKENKDEDDEEEAPVIAEIIDERPDEVKQLEVFRTSNKWKVLGGETLKDLTAKH
LYTLYKATNDESQEDPQSGTSSDGKGSRKTRHDSPGASPERRGRHDSPDLTPKRTTRHDS
PDLSPKRTTRHDSPDLSPKRTTRHDSPDLSPKRTTRHDSPDLSPKRTTRHDSPDLSPKRT
TRHDSPDLSPKRTTRHDSPDLSPKRTTRHDSPHLSPQRMTRHNSPKLSPKRKSRFDSPYL
SPPRHRTDTKHRRHDSASPSPPRKTQKHHHKASPQREKSKSSSARHVPDLDLSPPRRRPN
TRRDSDSDLSPPRKRVQGGKGSDSDLSPPRKRPQKKHGSDSDLSPPRRARAPDVQTGPQM
LSGGAAGLVSSETLRKEQEEMRRREKHNRPLEEESRHAQTIFRDKTGKKRDLESERAEQS
RKAGEKAEKDEKYAQWGKGLVQSQMQQQNVVDALREAQKPLARHIDDEDLDKMLREQERD
GDPMAALLRKKKEKNAKTKGIKERPRYQGPPPPPNRFNIMPGYRWDGVDRSNGFEQKRFT
RIADKKAVQEEAYKWSVEDM
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctccaagagcgtaacaagcgcaagtactagtatttcaaaagcggaatattta
aagcgctatttatcaaacgatgaagatggcaagaagtcaaaagagaagaaagctaagaaa
aaacgccctaaactcgccggaagagggatgaaaatagttgatgatgacattgactggagg
gaactggctgtgaacagggagaaggagaacaaggatgaagatgatgaggaggaggcgcct
gtcattgcagaaataatagatgagcgtccagacgaagtcaagcaacttgaagtctttaga
actagtaataagtggaaagttctgggaggtgagacgttaaaagatttaactgctaaacat
ctttataccttatataaagccacaaatgacgaatctcaagaggacccacagtcaggaaca
agctcagatggcaaggggagtagaaaaactcgacacgattctcctggtgcttctccagaa
cggagaggacgccacgattctccggatctaacgcccaagaggacgactcgccacgattct
ccggatctctcgcccaagaggacaactcgccacgattctcctgatctctcgcccaagagg
acaactcgccacgattctcctgatctctcgcccaagaggacaactcgccacgattctcct
gatctctcgcctaaaaggacgactcgccacgattctcctgatctctcccccaagaggacg
actcgccacgattctcctgatctctcccccaagaggacgactcgccacgattctcctgat
ctctcccccaagaggacgactcgccacgattctcctcatctctcgccccagaggatgact
cgccacaattctcccaaactctcacccaagagaaagtcacgcttcgattctccatacctt
tcacctcccagacacagaacagacaccaaacacagacggcatgactccgcttcaccttct
cctccacgaaaaacacaaaaacaccatcataaagcttctccacagagagaaaagtccaaa
tcctcttcagctagacatgtgccagacttagacctgtccccaccaagaagacgcccgaac
accagacgggactcagactctgatctgtctccccccaggaaaagagtgcagggaggaaag
gggtctgattctgacctgtctcctcccaggaagaggccacagaagaagcatggatcagac
tctgatctctctcctcctcgtagagctcgtgctcctgatgtacagacggggcctcaaatg
ttatctggtggagctgctggtctggtatcttctgaaaccctgaggaaagagcaggaggaa
atgcgcagaagagaaaaacacaaccgcccgctagaagaggagtcccgtcatgcacagact
atttttagagataaaacaggaaagaagcgtgacctggagtccgagcgtgccgagcagagc
aggaaagcaggggagaaggcagaaaaggatgagaaatatgcgcagtggggcaaaggactg
gtacagagtcagatgcagcagcagaacgtggtcgatgcactcagagaggctcagaagccg
ctggctcgtcacattgacgatgaggacctggacaagatgctgagagagcaggagagagac
ggagatccaatggctgctcttctgcgcaagaagaaggagaagaatgcaaaaaccaaagga
atcaaagagagacctcgttaccagggtccacctccacccccaaatcgcttcaacatcatg
ccgggatatcgctgggatggagtagacaggtccaatgggtttgagcagaagcgcttcacc
agaatagcagataagaaagcagtgcaagaggaagcatacaaatggagtgtggaggacatg
tag
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