KEGG   Ictalurus punctatus (channel catfish): 108279348
Entry
108279348         CDS       T04658                                 
Name
(RefSeq) cyclin-dependent kinase 9
  KO
K02211  cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108279348
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ipu01001]
    108279348
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ipu03021]
    108279348
Enzymes [BR:ipu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     108279348
    2.7.11.23  [RNA-polymerase]-subunit kinase
     108279348
Protein kinases [BR:ipu01001]
 Serine/threonine kinases: CMGC group
  CDK family
   108279348
Transcription machinery [BR:ipu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     108279348
    Brd4/P-TEFb complex
     108279348
    7SK RNP complex
     108279348
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Haspin_kinase ABC1 Pkinase_fungal
Other DBs
NCBI-GeneID: 108279348
NCBI-ProteinID: XP_017349020
Ensembl: ENSIPUG00000021318
UniProt: A0A2D0T349
LinkDB
Position
18:683045..689463
AA seq 394 aa
MQRDKTGSSAVSGDKPDRETAIMSKYYDGVEFPFCDEFSKYEKLAKIGQGTFGEVFKAKH
RQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQFNRYKGS
IYLVFDFCEHELAGLLSNANVKFTLSEIKKVMQMLLNGLYWIHRNKILHRDMKAANVLIT
RDGVLKLADFGLARAFSLAKNSQGSCYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI
MAEMWTRSPIMQGNTEQHQLTLISQLCGSITAEVWPGVDKKYELYQKMELPKGQKRKVKE
RLKAYVKDPYALDLIDKLLVLDPAQRVDSDDALNHDFFWSDPMPSDLKHMLSTHNTSMFE
YLAPPRRRGHMPQQPANQNRNPATASQSEFDRVF
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgcagcgagacaagactgggagctcggcggtgtctggcgataagccggaccgggagacc
gccatcatgtccaaatattacgacggcgtcgagtttcctttttgcgacgagttttctaag
tacgaaaagctcgccaagatcggccaaggcaccttcggggaggtgttcaaggccaaacac
agacagactggcaagaaagtagcgctgaagaaggtgctcatggaaaatgagaaagaaggg
tttcccatcacagcactgagggagatcaagatcctgcagctgctaaagcacgagaacgtc
gtaaatctgatcgagatctgtcgaacaaaagccacccagtttaaccgttacaagggcagc
atatacctggtgtttgatttctgtgagcacgaactggctggcctactaagcaacgccaat
gttaagttcacgctgtcggagattaaaaaggtcatgcagatgctgctgaatggactctac
tggatccacagaaacaagatcctgcacagagacatgaaagcagcaaacgtgctcatcaca
agggatggagtgctgaaactggctgattttggcctggcaagagccttcagcctggcaaag
aacagccagggcagttgctacaccaaccgagtagtgaccctgtggtaccgacctccagag
ctcctgctgggagagcgtgattacgggccacccatcgatctgtggggtgcagggtgtatc
atggcggaaatgtggacgaggagccccatcatgcagggaaacacagaacagcaccaactc
actctgatcagccagctgtgtggatccattactgcggaagtgtggcccggtgtggataaa
aaatatgagttgtaccagaagatggagttacccaaaggacagaagcgaaaggtaaaagag
cgtctgaaggcgtatgttaaagatccatacgctctggatctgatcgataagctgctggtg
ctggacccagcgcagcgtgtggacagtgacgacgctctcaaccacgacttcttctggtct
gatcccatgccctctgacctcaaacacatgctctccacacacaacacgtccatgtttgaa
tacctggcccccccgcggcgccgtggtcacatgccccaacagccagccaatcagaaccgc
aacccagctacagccagccagtctgagttcgatcgtgttttctga

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