Ictalurus punctatus (channel catfish): 108279351
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Entry
108279351 CDS
T04658
Symbol
gabrg2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2 isoform X2
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
ipu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108279351 (gabrg2)
04082 Neuroactive ligand signaling
108279351 (gabrg2)
04519 Cadherin signaling
108279351 (gabrg2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108279351 (gabrg2)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108279351 (gabrg2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
PH_24
Motif
Other DBs
NCBI-GeneID:
108279351
NCBI-ProteinID:
XP_017349025
Ensembl:
ENSIPUG00000018132
UniProt:
A0A2D0T355
LinkDB
All DBs
Position
18:9108953..9144189
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AA seq
381 aa
AA seq
DB search
MFVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNS
KKADAHWITTPNRMLRIWNDGRILYTLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPK
EEIIYKWKRSSVEVGDIRSWRLYQFSFVGLRNISDIISTFSGDYVVLTVFFDLSRRMGYF
TIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAM
DLFVSVCFIFVFAALIEYGTLHYFVSNRKPSKNKDKKKKNPLLRLFSSKNPTVDIRPRSA
TAIQMNNATHMQERDEEFGYECLDGKDCTSFFCCFEDCRSGAWRHGRLHIRVSKIDSYAR
IFFPTAFGLFNLVYWVSYLYL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttaatagcatcggccctgtaaacgcaatcaacatggaatacactatcgacatc
ttcttcgctcagacctggtacgacagacgcctgaagttcaacagcaccatgaaggtcctg
cgtctcaacagcaacatggtaggaaagatctggatccctgacaccttcttccggaactcc
aagaaggccgacgcccactggatcaccacacccaatcgcatgctccggatttggaacgat
gggcggatcctgtacacgctgaggttgaccatcgatgccgagtgccagcttaaactgaat
aactttcccatggatgagcattcctgtcccctggagttctcgagctacggatacccgaag
gaggagatcatttataagtggaagcggagttctgtcgaggtcggagacatccgctcctgg
aggctgtatcagttctccttcgtgggtctgaggaacatctcggatatcatcagcaccttt
tcaggtgactatgtggtgctgaccgtcttcttcgacctgagcagaagaatgggctacttc
accatccagacctacatcccctgcaccctgatcgtcgtcctctcctgggtctccttctgg
atcaacaaggacgctgtccctgctcgcacatccttaggaatcaccacggtgctcaccatg
acaacgctcagcaccatcgccaggaagtcgctgcccaaagtgtcgtacgtgacggccatg
gacctgttcgtgtccgtgtgcttcatcttcgtgttcgcggcactgatcgagtacggaacg
ctgcactacttcgtgagcaaccgcaaaccgagcaagaacaaagacaagaagaagaaaaac
ccgctcctccggctgttttcctcaaagaacccgacggtggatatccgtccccgctcggct
acggcgatccagatgaacaacgccacgcacatgcaggagcgcgacgaggagttcggctac
gagtgtctggacgggaaagactgcacaagcttcttctgctgctttgaggattgtcgttcc
ggggcatggcgtcacggtcgcctgcacattagggtctccaagatcgactcgtacgcacgc
atcttcttccccaccgccttcggcctcttcaacctcgtatactgggtgtcatacctgtac
ctgtga
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