Ictalurus punctatus (channel catfish): 108279352
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Entry
108279352 CDS
T04658
Symbol
cldn2
Name
(RefSeq) claudin-2
KO
K06087
claudin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03272
Virion - Hepatitis viruses
ipu04382
Cornified envelope formation
ipu04514
Cell adhesion molecule (CAM) interaction
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108279352 (cldn2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108279352 (cldn2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108279352 (cldn2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108279352 (cldn2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108279352 (cldn2)
04147 Exosome [BR:
ipu04147
]
108279352 (cldn2)
Cilium and associated proteins [BR:
ipu03037
]
Other cilia and associated proteins
Stereociliary proteins
108279352 (cldn2)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
108279352 (cldn2)
Exosomal proteins of colorectal cancer cells
108279352 (cldn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
108279352
NCBI-ProteinID:
NP_001316237
Ensembl:
ENSIPUG00000007394
UniProt:
A0A0B5H379
LinkDB
All DBs
Position
18:complement(23056799..23069408)
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AA seq
280 aa
AA seq
DB search
MAIAAVELMGFFLGILGMIGNLVATLLPYWEVSAHIGQNIVTAVTNMKGLWMACVHQSTG
VFQCETFSTSLGLSTELQAARAMMVFSVIFSALACAVSSVGMQCTTCMDGFSGAKAKAAG
AGGCLFFIAGLLSLIPISWQTHEVVQTFYQYTEHDGLKFEIGDCLFVGFASSIVSLLGGG
LLSMSCCSYKDVQRRFRHHAGGYPYPERVGKHGTGRSASGWTPFRPSATLQSGINMNPTN
RTQTMDSHYSSSSQSTTGVQDSTKPAHRKPAASYEVTGYV
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggccatagccgcagtggagttgatgggcttcttcttgggaatcctgggtatgattgga
aacttagtggccaccctgctgccctactgggaagtctcggcccacatcggccaaaacatc
gtcacggctgtgacgaacatgaagggcctgtggatggcgtgcgtccaccagagcacagga
gtcttccagtgcgagaccttcagcacaagcctcggcctatccaccgaactgcaggcggcc
cgggccatgatggtcttctcagttatcttttctgccctagcctgtgcagtgtccagcgtt
gggatgcagtgcaccacgtgcatggacggcttctcgggagccaaggcgaaagcagctgga
gccggcgggtgccttttttttatcgccggtcttctgtcgctcattcccatttcctggcag
acccatgaggtagtgcagaccttctaccagtacaccgaacatgacggtctgaagttcgag
attggggactgcctgtttgtcgggtttgcctcgtctatagtgtctctgttaggcggaggg
ctgctaagcatgtcctgctgcagttacaaggatgtacagcgaaggttcagacaccacgcc
gggggttacccgtaccccgaacgcgtaggaaaacacggcacgggccgtagcgcctcaggg
tggacgcccttccgcccttcagccactctgcagagcggaatcaacatgaatcccaccaac
aggacccagaccatggacagccactacagtagcagcagccagtccactaccggcgtccaa
gactccacgaaaccggcacaccggaaaccggcagctagctatgaagtcaccgggtacgtc
tga
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