Ictalurus punctatus (channel catfish): 108279375
Help
Entry
108279375 CDS
T04658
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03030
DNA replication
ipu03410
Base excision repair
ipu03420
Nucleotide excision repair
ipu03430
Mismatch repair
ipu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108279375
03410 Base excision repair
108279375
03420 Nucleotide excision repair
108279375
03430 Mismatch repair
108279375
03440 Homologous recombination
108279375
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108279375
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108279375
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108279375
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108279375
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
108279375
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
108279375
MMR (mismatch excision repair)
DNA polymerase delta complex
108279375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
108279375
NCBI-ProteinID:
XP_017349085
Ensembl:
ENSIPUG00000002408
UniProt:
A0A2D0T3B1
LinkDB
All DBs
Position
18:complement(18620401..18630078)
Genome browser
AA seq
471 aa
AA seq
DB search
MQRRVCFQGDQRCAAMDELYLDNIDEYVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYIE
QRRKERSGNTLHATYLVSGKCLENGNMCHKVSVVREDKLEDVKSKLDVTISVHVYSVQKA
ELKDSAPLYSTDYDAMKENLKNCNKYSAIRCAAAVPISTAELQRAQEMVMSTATDKEANK
PVVNNYTAPASKPTSKQPKGIMGMFANKAAPKSEEQSREVKMEQADDPSPAEGQKTKLSS
KASAMNNFFGKSADKKLDKADKNVKEKADGGPTSSLAGSTKQSCSSSKPKQNIKEELPKV
DEVIKDDAKETRSKTKRLEHLHSEDERVEIQKKKRRRIKDSQPDSSDDEVIPDSPPAPEL
QIPSPEKHVKKEPVLHSSEGRRRKRRRVLKSRTFMDDEGCIVTEKGYESESYSESEDESK
AQPSEDSSSVKQPLSRLDEEKKVKEKSQKKAPSATNKTTKQASITGFFQKK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagagtgtgtttccagggtgatcaacgttgcgccgccatggatgagctttat
ttagacaacattgacgaatatgttaacgatcagaataaaattgtcacctataaatggctg
agtcttactcttggtgtccatgttaacacagctaaacaaatgctgtatcactacatagag
cagcgacggaaggagcggtctggaaacactctgcatgcaacttacttagtctctgggaag
tgcttggagaacggcaacatgtgtcataaggtgtcagtagtgcgtgaagacaagcttgag
gatgtaaaatccaagctggatgtgacgattagcgtgcatgtgtacagtgttcagaaagct
gagctgaaggacagtgcaccgctatacagtactgactacgatgctatgaaagagaacctt
aaaaactgcaacaagtacagtgcaattcgctgtgccgctgctgtaccgatatccacagca
gagttacagagggctcaagaaatggtcatgtctactgcaactgacaaagaggccaataaa
cctgttgtcaacaactacacagcacctgcatccaaacctacctccaaacagccaaaaggc
atcatggggatgttcgcaaataaagcagctcctaaaagtgaagagcagagcagagaggtg
aagatggagcaggctgatgatccatctcctgctgaaggacagaaaacaaagttgtcttcc
aaagctagcgctatgaacaatttttttgggaaatcagcagacaaaaagcttgacaaagca
gacaaaaacgtaaaagaaaaggcagatgggggtccaacgtcatcacttgcagggagcaca
aaacagtcttgcagttcatccaaacctaagcagaacataaaggaggaattaccgaaggta
gatgaagtgattaaagatgatgccaaagagacccggagtaaaacgaagcgtctagagcat
ttgcacagtgaagatgaacgagtggagattcagaagaaaaagagacggaggataaaagat
tctcagcctgacagcagtgatgatgaggtaattccagattctccacctgcacctgaactg
cagataccaagtcctgaaaagcatgtgaaaaaggagcctgttttacatagctctgagggc
aggaggaggaagaggagacgggtattaaagtcccggacatttatggacgatgaaggctgt
attgtgacagagaaaggctacgagagtgaatcttactctgagagtgaagacgaatccaag
gctcaaccttctgaggattcaagctcagtcaagcagccactctcaaggttggatgaggag
aaaaaggtcaaagagaaaagtcagaagaaggctccttctgctacaaataaaacaacaaaa
caggcatctatcacaggctttttccagaagaaatga
DBGET
integrated database retrieval system