Ictalurus punctatus (channel catfish): 108279378
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Entry
108279378 CDS
T04658
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04068
FoxO signaling pathway
ipu04110
Cell cycle
ipu04120
Ubiquitin mediated proteolysis
ipu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108279378
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
108279378
04150 mTOR signaling pathway
108279378
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108279378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108279378
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108279378
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_6
LRR_At5g56370
DUF7885
LRR_FBXL18
LRR_NXF1-5
LRR_R13L1-DRL21
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
108279378
NCBI-ProteinID:
XP_017349092
Ensembl:
ENSIPUG00000001858
UniProt:
A0A2D0T2F0
LinkDB
All DBs
Position
18:18169683..18178731
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AA seq
411 aa
AA seq
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MSAERPLQELPCLSENLDGSLLCMSQSKAKKRPCAYGDGLHTENTPHELIQNWSPPHKQP
RPCAKGKENCFVLARRPRRSRDTAGVLCWDTLPDELLLGIFSCLSLQDLLRTSRVCKRWH
RLAFDESLWNSADLVGKAQLNSELGQVLTAGVSRLRCPHSCIGEPCFKNTQLLRVQHLDL
SSCTVQTSVLEDILSRCRRLQNLSMEGLVLSDSIFRSLSENTELVRLNLCGCSGFSADSL
TEMLQSCTKLEELNVSWCDFSSEHVKAVVNNIPSTITQLNISGYRQSFTMDDVKVLVERC
PNLTHLDLSDSVLVTTDSFPFLQKLSSLRHLALSRCYQIHPAALVEFEKFVTLQTLEVFG
LIQDSSLPILSKGLPRTQINTQPFSGVARPTAATRKDRTLWGMHCRLVYKP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgagaggcctctccaggagctgccgtgtctgagtgagaacctcgatggctct
ctgctgtgcatgtcacagtccaaagcaaagaaaaggccgtgtgcatatggagacggtctg
cacactgaaaacactcctcacgagcttatccagaactggtctcctccccataaacagcca
cggccctgtgccaagggcaaagagaactgctttgtcctcgccagacgccccaggaggagc
agagacacagcgggggttctgtgttgggacactctccctgacgagctgctgttggggatt
ttctcttgtctctcactgcaagacctactcaggacatcccgcgtctgcaagcgctggcat
cgactggcgtttgatgagtcactgtggaacagcgctgacttggtgggaaaagcacaactg
aacagcgagctgggtcaggtgctcacagcgggggtgtcgaggctgcgctgtccacactca
tgcatcggtgaaccctgctttaagaacacacaactcctgcgtgtccagcatttggacctg
tccagctgtactgtgcagacatctgtgctggaggacatcctgtcgcgctgcagacggctg
cagaacctcagcatggagggactcgtgctttctgactccatcttccgatctttgagtgag
aacacagagctggtgcggctgaacctgtgcggctgttctggtttttctgcggactctctg
actgagatgcttcaatcctgcacaaagcttgaggagctgaacgtgtcgtggtgtgacttc
agcagtgaacatgttaaggctgtcgtcaacaacatcccgtccaccatcactcagttaaat
atcagcggttacagacaaagttttaccatggatgatgtaaaggttttggtggaaagatgt
ccgaatctcacgcatttagatttgagtgacagtgtccttgtgactacagacagtttcccc
ttcctgcagaagctctcctcactgagacatttagcactgagccgctgttaccagattcac
ccagctgctctcgtagagtttgagaagttcgtgactctgcagaccctggaggtgtttggt
ctaatacaggacagctccctgcccatcctgagtaaagggttgccacggacacagatcaac
acccagccgttctcaggtgtggcccgtcccactgcggcaacgcgaaaagaccgcacgctg
tggggaatgcactgtcgactggtgtataaaccctaa
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