Ictalurus punctatus (channel catfish): 108279394
Help
Entry
108279394 CDS
T04658
Symbol
lhfpl2a
Name
(RefSeq) LHFPL tetraspan subfamily member 2a protein
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
108279394 (lhfpl2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108279394 (lhfpl2a)
03037 Cilium and associated proteins [BR:
ipu03037
]
108279394 (lhfpl2a)
Transporters [BR:
ipu02000
]
Other transporters
Pores ion channels [TC:
1
]
108279394 (lhfpl2a)
Cilium and associated proteins [BR:
ipu03037
]
Other cilia and associated proteins
Stereociliary proteins
108279394 (lhfpl2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
L_HMGIC_fpl
Claudin_2
Motif
Other DBs
NCBI-GeneID:
108279394
NCBI-ProteinID:
XP_017349123
Ensembl:
ENSIPUG00000002787
UniProt:
A0A2D0T2I1
LinkDB
All DBs
Position
18:complement(18766823..18779881)
Genome browser
AA seq
216 aa
AA seq
DB search
MCHVIVTCRSMLWTLLSIAAAFSELIAFLSTDWLVGFPRVPDSASEATSEAYRPTLGLFG
RCVFVGRVMCGPYALTFSEIASGFWKAAAIFLATGILLLSAVAFTSIFTICFQSIMRKSI
FNVCGLLQGIAGLFLILGQLLYAAGWGSEKVKQYCGVNSSAYNPALCSVGWAFYTALLGT
VLSFISAVFSAQAEIATSSDKVQEEIQQGKNLICLL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatgtgattgtgacgtgccgctccatgctctggacactcctcagtatcgccgcg
gccttcagcgagctcatcgctttccttagcactgattggctcgtggggttcccacgtgta
cctgactctgcctctgaggcaaccagtgaggcctaccgccccacactggggctttttggg
cggtgtgtgtttgttggcagagtcatgtgtggcccttacgcgctgacattcagtgagatc
gcgagcggattctggaaggcggcagccatttttctggcgacaggaatcctgctgctcagc
gccgtggccttcacttccattttcaccatctgtttccagagcatcatgaggaagagcatc
ttcaatgtgtgtggactactgcagggcatcgcaggtctgttcctgatcctgggccagttg
ttgtacgccgcagggtggggcagtgagaaggtgaagcagtactgtggtgtaaactcgtcg
gcgtataacccggcgctgtgctcagtgggctgggctttttacacagcgctgctcggcact
gtgctcagcttcatcagcgccgtgttcagcgcgcaagccgagatcgccacatccagcgac
aaagtccaggaggagatccaacagggcaaaaacctcatctgcctcctctga
DBGET
integrated database retrieval system
