Ictalurus punctatus (channel catfish): 108279397
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Entry
108279397 CDS
T04658
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108279397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108279397
04131 Membrane trafficking [BR:
ipu04131
]
108279397
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108279397
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108279397
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108279397
mRNA cycle factors
P-body specific factors
108279397
Membrane trafficking [BR:
ipu04131
]
Others
Actin-binding proteins
Myosins
108279397
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108279397
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108279397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Myosin_N
AAA_22
NPHP3_N
nSTAND3
MYO6_lever
Ac76
AAA_16
Peroxidase_2
Motif
Other DBs
NCBI-GeneID:
108279397
NCBI-ProteinID:
XP_053543668
Ensembl:
ENSIPUG00000001724
UniProt:
A0A9F7RVA1
LinkDB
All DBs
Position
18:18031351..18107438
Genome browser
AA seq
1814 aa
AA seq
DB search
MTTDQELYVKYTRVWIPDPEEVWKPAEIIKDYKEGESVLHLKLEDESTLPYPIGPKDNPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIY
GEEVINAYSGQNMGDMDPHIFAVAEEAYKQMGRDEKNQSIIVSGESGAGKTVSAKYAMRY
FATVGGSASDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRYHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLALNSAEDFTYTSLGQNIVIPGV
NDAVDLEKTREALTMLGVKESHQMSIFKIIASILHLGNVDIVSERDKESCHIPRNDPHLL
HFCELLGIEQDQMENWLCHRKLATATETYVKNMSSAQANTARDALAKHIYAHLFDWIVEH
INKALHTSTKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWVQKLYSRHTSSEHFE
KPRMSNTSFIVVHFADKVEYQCDGFLEKNRDTVYEEQINILKASKFQLVADLFQDEKGAP
VSAGKTSKINVRPAKPMPKSHNREHRKSVGTQFRSSLHLLMETLNATTPHYVRCIKPNDV
KEAFVFDSKRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMKKKDVTTDKKQV
CRNLLETLVKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRFACIKMQKTVRGWLQRRRY
QKIRKSTILLQRYGRGFLARRYAELLRLTRAALICQKQYRMVRVRKAYLTIRKATITIQA
FTRGMFTRRLYQEYVLHHKASVIQRTVRGWLQRRKFLRARNAAVVLQCAYRRVLAKRQLK
QLKIAARTAEHFKDLNVGMENKIVQLRRKMDTQKHEYKVQSEKLSEANTALVTEVSKLQK
ELETARNRKGETTQLSSLQDELEKLRAELQEAHAQRKKLEEEHSTEKLGLEQRVQELERE
NSLLKDEKEAMNQKILRQSQSSGGKGGSLSQKEASLQAELDEERLRYQNLLKEFSRLEQR
CDNLQEEATYAKFVPGHRRSPSIQSSLGSDSTFPSISMSEVGDTEDTIQQVEDMGLEKAA
NDISVFMKLQKRVRELEQERKRLQTNLEKMEELGKHKAIEANSSTSEADTNADLAYNSLK
RQELESENKKLKNDLNELRKALADRASENCSSNEPQDSYNVLLNQLKAANEELDIRKEEV
LMLKTQIVSTAKPSENTNHINSNEIIWDNSKKPVDKEEVLQGYQGLSESKRLLEAQLQSQ
NRKHKDELEALHTQIEVMKVDLEKKQEMLNHFSTLPPDALVEFSVQQEITRLTNENLDLK
EIMEKLEKNERKLKKQLKIYIKKVQELEASQAAANRPKLVRQVTVQRKEKDFEGMLEYYK
EDEALLVRMLISDMKPQDVSATVPCLPAYILFMCIRHADYINDDQKVHSLLTSTINAIKK
LLKKNSEDFEMTSFWLANTSRLLHCLKQYSGEEAFMTQNTPKQNEHCLKNFDLAEYRQVL
SDLSIQIYQQLVRIAEGMLQPMIVSAMLESGSLTGVKPMGYRNRSSSVDCDSGGPSSYTL
EVLIKQLGQFYTLMSDHGLDPEIIQQVVRQLFYSINAVSLNNLLLRKDVCSWSTGMQLRY
NISQMEEWLRGRNLHQREVMLTIEPLIQAAQLLQVKKKTSQDAEAICSMCNILSMQQIVK
ILNLYTPLNEFEERVTVSFIRDIQNLLQGRTENNLLLVDTKHTFPVLFPYTPSALSLETM
HIPASLNLDFLVRV
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgaccaggagctctacgtcaagtacactcgggtttggatccccgacccagag
gaggtgtggaagcctgctgagattattaaagactacaaagaaggagagtctgtcttgcac
ctcaaactcgaagatgaatcgacattgccatatccaatcggtcctaaagacaacccgctg
ccattccttcgaaaccctgacatactggtgggagagaacgacctcacggccctcagctac
ctgcatgaacctgcggtgctgcacaacctcaaggttcgcttcctggagtccaaccacatc
tacacctactgtggtattgtactggtggccattaatccatacgagcagctgccgatttat
ggcgaggaggtcatcaatgcctacagcgggcaaaacatgggtgacatggaccctcatata
ttcgccgtggcagaggaggcttataaacagatgggcagagatgagaagaaccagtcgatc
atcgtgagtggagagtcaggagctgggaagacagtctccgctaaatacgccatgcgctac
ttcgccactgtgggaggatccgccagtgacacgaatgtggaggagaaagtgctggcgtcc
agccccatcatggaggctatcggaaatgcgaagacgacacgtaacgacaacagcagccgc
ttcgggaaatacatccagatcggctttgacaggaggtatcacatcatcggtgccaacatg
cgcacgtatttgctggagaagtccagagtggtgtttcaggctgaggatgaaaggaactac
cacatcttctaccagctgtgtgcctctgcctcgctccccgagttcaaagacctggccctg
aacagtgcagaagacttcacttacacctctctgggtcagaacatcgtcattccgggggtt
aatgatgctgtggacttggagaagacacgggaagccctgaccatgctgggtgtgaaggag
agccatcagatgagcatcttcaagataatcgcctccatattgcaccttgggaatgtggac
atagtttctgagagagataaagagtcatgccatatccccagaaacgaccctcaccttctc
catttctgtgagctgctggggatcgagcaggaccagatggaaaactggctgtgccataga
aagttagccacggcaaccgagacctacgtgaaaaacatgtccagcgcccaggctaatacc
gcccgcgacgctctggccaaacacatatacgcccatttgttcgactggatcgtggagcac
atcaacaaagccctgcatacctccaccaaacagcactccttcatcggagtgttggatatc
tatggatttgaaacgtttgagattaacagcttcgagcaattctgcatcaactacgccaat
gagaaacttcagcaacagttcaactctcatgtttttaaactggagcaagaggagtacatg
aaggagcaaatcccatggacgctcatcgacttttacgacaaccagccttgcattgaccta
atcgaggccaagctcggtatcctggacctgctggatgaagagtgcaaggtacccaaagga
accgatcagaactgggtgcagaagctgtacagccgccacacaagcagcgaacacttcgag
aagccgagaatgtccaacacgtcgttcatcgtggtccactttgcggataaggttgagtat
cagtgtgatggtttcctggaaaagaacagggacacagtgtatgaagaacagatcaacatc
ctgaaggccagcaagttccagctggtggcagatctcttccaggatgaaaaaggagctcct
gtttcagcaggaaaaacctccaagatcaacgtacgtcctgctaaacccatgccgaaaagc
cacaaccgcgagcaccgcaaatctgtaggcactcagtttcggagttccttacatcttctg
atggagactctgaatgctacaactccgcactacgtacgctgcataaaacctaacgacgtc
aaagaagcctttgtgtttgattccaaaagagccgtccagcagctacgagcatgtggtgtt
ctggagaccattcgcatcagtgctgcaggatatccatccaggtggacgtacccagatttc
tttaacagataccgggtgctgatgaagaagaaggacgtgaccactgataagaagcaggtg
tgcagaaacctgctggagactctggtcaaggacccagataagttccagttcggaaagact
aagatcttcttccgagccggtcaggtggcgtacctcgaaaagctcagagccgacaagttc
cgtttcgcctgcattaagatgcagaagacggtgcgaggatggctgcagaggagacgctac
cagaagatccgcaagtccaccatcttgctgcagagatacggccgtggcttcctggcgcgc
aggtatgcagaactgttgcgtctcacccgagcagctcttatctgtcagaagcagtacagg
atggtgagggtacggaaagcgtatctgaccatccgcaaggctacaatcaccatccaggcc
ttcacacggggcatgttcacacgccgcctgtaccaagagtacgtgctgcaccacaaggcc
agtgtcatccagagaacagtgcgcggatggctgcagaggaggaagttcctccgtgcccga
aacgcagcagtggtgctgcagtgcgcttacaggcgtgtactcgccaagcgacagctgaaa
cagctgaagatcgcggctcgcacagcagaacacttcaaggatctcaacgtcggcatggag
aataagattgtccagcttcgaagaaagatggacactcagaaacacgagtataaggtgcag
agtgagaagctgtccgaagccaacaccgcattggtcacggaggtcagcaaactgcagaag
gagctggagacggcacgcaatcgtaaaggcgagaccacgcagctgagctcactgcaggac
gagttggagaaactgagggcggagctccaggaggcacacgcccaaaggaaaaagctcgag
gaggagcacagcactgagaagctgggactggaacagagagtccaggagctggagagagaa
aactctctgctgaaggatgagaaagaagcgatgaaccagaagatccttcgccaatcgcag
agctccgggggtaaaggtggcagtttgtctcagaaagaggctagtctacaggctgagttg
gatgaagagagactgcgctatcagaatctgctgaaggagttttccagactggagcagaga
tgtgacaaccttcaggaagaagccacttatgccaaatttgttccaggccatcggagaagc
ccatccatccaaagcagcttgggctctgactccacattcccctccatctctatgtctgag
gtgggagacactgaggacaccattcagcaggtggaggacatgggactggagaaggcagcc
aacgacatcagtgtattcatgaagctgcagaaaagagtacgagagctggagcaagagagg
aagagactccagaccaacctggagaagatggaggagctcggcaagcacaaagcgattgaa
gcaaatagctcaacgtcagaggcagacacaaatgcagatctggcctacaacagtctcaag
aggcaggagctggagtctgagaacaagaagctgaagaacgacttgaatgaactcaggaag
gcgctggcggaccgggcctccgagaactgctcgtccaatgaaccgcaagacagctacaat
gttctgctcaatcagctcaaagcagccaatgaggaactggatatacgcaaagaggaggtt
cttatgctaaaaacacagatcgtcagcaccgccaagccatcagaaaacaccaatcacatt
aactccaatgaaatcatatgggacaacagcaaaaagcctgtggacaaggaggaggttttg
cagggctaccagggtctcagtgagtccaagaggcttctggaggcacagcttcaatcccag
aacaggaagcacaaggatgagctggaggctctgcacacgcaaatcgaggtgatgaaggtg
gatctggagaagaagcaggagatgctgaatcacttcagcacgctgccccccgatgccctg
gtggagttcagcgtccagcaggagatcacacgcctcaccaacgagaacctggacctcaag
gagatcatggaaaagctggagaaaaatgagagaaaactgaaaaagcagctcaagatctac
atcaagaaagttcaggagcttgaagcatctcaggcagcggcgaatcggcccaagctggtc
aggcaggtcacagttcagaggaaggagaaggactttgagggcatgctggagtactacaaa
gaggacgaggccctgctggtcaggatgcttatcagcgacatgaagccccaggacgtttct
gctacagtaccttgtctcccagcgtacatcctcttcatgtgcatccggcatgcagactac
atcaacgatgaccagaaagtgcactctctgctcacctccaccattaacgctatcaagaaa
cttctcaagaaaaacagcgaagactttgagatgacatctttctggctagctaacacgagt
cgacttctgcactgcctgaaacagtacagtggagaggaggcattcatgacccagaacaca
ccaaaacagaacgagcactgcctgaagaactttgacttggctgagtaccggcaggttctg
agtgacctgagcatccagatctaccagcagctcgttagaatagctgagggcatgctgcag
cccatgatcgtgtcggccatgctagagagcggcagtctgactggagtgaagcccatgggc
tacaggaaccgctcctccagtgtggactgtgacagtggaggcccatcaagctacacgctg
gaggttttgatcaagcagctcggtcagttctacacactcatgagtgaccatgggctcgac
cctgagatcatacagcaggttgtgcgccagctcttctacagcatcaacgctgtctcactt
aacaacctgctgctgcgcaaagacgtgtgttcctggagcaccggcatgcagctcaggtac
aacatcagtcaaatggaggagtggttgaggggacgaaatcttcaccagagggaagttatg
ttaaccatcgagcccctcatccaggctgctcagctgctacaggtgaagaagaagacatct
caggacgctgaggccatctgctccatgtgcaatattctgagcatgcaacagattgtgaag
atcctgaatctgtacacgccgctgaacgagtttgaggagagggtcactgtgtccttcatc
agagacatacagaatcttctacaaggccgtacagagaacaacctgctcctggtggacacc
aagcacacgttccctgtgctcttcccttacactccttcagctttgagcctggaaacgatg
cacatccctgcctctctcaacctggacttcctcgtcagagtctga
DBGET
integrated database retrieval system
